Gene Smed_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3453 
Symbol 
ID5324339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3661523 
End bp3662311 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID640792403 
Producthypothetical protein 
Protein accessionYP_001329106 
Protein GI150398639 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTCG TTTCCAAAAT CTTCTGGCTC GTCGCCCAGC CGCTATCACT CGCCTTTCTC 
ATGCTGCTCG TCGGCGTGCT GCTCATGCTC ACCCGCTTCC GTCGAACGGG TGGCGGTATC
AGCGTCTTCG GGCTCGCCGT GCTTTTCATC ACTCTCTTCA CCACGGCCGG CTCCTATTTC
CTGCAGATCC TGGAGGATCG CTTTCCCCGC CCCTCGCCGG AGCCGGCGGA GCTTGCCTGC
ATGATCGTGC TTGGCGGCGC CTTCGAGAAT GTGGTCATGG CGAGCCGCGG CGGCATCGAG
ATGAATCAGG CGGCGGAGCG TTTCGTCGAG ACCCTGAGGC TGGCGCGGGC CCATCCGGGG
GCGCGCATCC TCGTATCCGG AGGCGACGGC TCGCTCAGCG GCATCTACGA GGGCGACGCG
CATGCCTCTG CAGCTTTTTT CGGGACCTTC GGCATCGGCC CGGAGCGCCT GATCCGTGAG
GGAGAATCGC GGACGACCTT CGAAAACGCC CGCAATACAC GGCACCTCCT CCGGGAAAAC
GGGCTCGATC GTTGCGCGCT CGTGACCTCG GCCTATCATA TGCCCCGTTC TGTGGGCCTC
TTTCGCGCGA ACGACATCGA GGTGACGCCC TGGCCGGTGG ATTACCGTAC GAGCGGCAAG
GTGCGGCTCG GCGTGGATTT CACCCAGCCA TCACTCAATG CCCAATTGGC GACGACGGCC
GCCAAGGAAT GGACCGGACT GCTCGCCTAT TATCTTCTCG GCCGGACGCA GACGCTGCTG
CCGCGTTAG
 
Protein sequence
MFLVSKIFWL VAQPLSLAFL MLLVGVLLML TRFRRTGGGI SVFGLAVLFI TLFTTAGSYF 
LQILEDRFPR PSPEPAELAC MIVLGGAFEN VVMASRGGIE MNQAAERFVE TLRLARAHPG
ARILVSGGDG SLSGIYEGDA HASAAFFGTF GIGPERLIRE GESRTTFENA RNTRHLLREN
GLDRCALVTS AYHMPRSVGL FRANDIEVTP WPVDYRTSGK VRLGVDFTQP SLNAQLATTA
AKEWTGLLAY YLLGRTQTLL PR