Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3453 |
Symbol | |
ID | 5324339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3661523 |
End bp | 3662311 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640792403 |
Product | hypothetical protein |
Protein accession | YP_001329106 |
Protein GI | 150398639 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCTCG TTTCCAAAAT CTTCTGGCTC GTCGCCCAGC CGCTATCACT CGCCTTTCTC ATGCTGCTCG TCGGCGTGCT GCTCATGCTC ACCCGCTTCC GTCGAACGGG TGGCGGTATC AGCGTCTTCG GGCTCGCCGT GCTTTTCATC ACTCTCTTCA CCACGGCCGG CTCCTATTTC CTGCAGATCC TGGAGGATCG CTTTCCCCGC CCCTCGCCGG AGCCGGCGGA GCTTGCCTGC ATGATCGTGC TTGGCGGCGC CTTCGAGAAT GTGGTCATGG CGAGCCGCGG CGGCATCGAG ATGAATCAGG CGGCGGAGCG TTTCGTCGAG ACCCTGAGGC TGGCGCGGGC CCATCCGGGG GCGCGCATCC TCGTATCCGG AGGCGACGGC TCGCTCAGCG GCATCTACGA GGGCGACGCG CATGCCTCTG CAGCTTTTTT CGGGACCTTC GGCATCGGCC CGGAGCGCCT GATCCGTGAG GGAGAATCGC GGACGACCTT CGAAAACGCC CGCAATACAC GGCACCTCCT CCGGGAAAAC GGGCTCGATC GTTGCGCGCT CGTGACCTCG GCCTATCATA TGCCCCGTTC TGTGGGCCTC TTTCGCGCGA ACGACATCGA GGTGACGCCC TGGCCGGTGG ATTACCGTAC GAGCGGCAAG GTGCGGCTCG GCGTGGATTT CACCCAGCCA TCACTCAATG CCCAATTGGC GACGACGGCC GCCAAGGAAT GGACCGGACT GCTCGCCTAT TATCTTCTCG GCCGGACGCA GACGCTGCTG CCGCGTTAG
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Protein sequence | MFLVSKIFWL VAQPLSLAFL MLLVGVLLML TRFRRTGGGI SVFGLAVLFI TLFTTAGSYF LQILEDRFPR PSPEPAELAC MIVLGGAFEN VVMASRGGIE MNQAAERFVE TLRLARAHPG ARILVSGGDG SLSGIYEGDA HASAAFFGTF GIGPERLIRE GESRTTFENA RNTRHLLREN GLDRCALVTS AYHMPRSVGL FRANDIEVTP WPVDYRTSGK VRLGVDFTQP SLNAQLATTA AKEWTGLLAY YLLGRTQTLL PR
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