| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3452 |
|---|
| Symbol | |
|---|
| ID | 5324338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 3660796 |
|---|
| End bp | 3661431 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640792402 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001329105 |
|---|
| Protein GI | 150398638 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2860] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCC TCGAATTCCT CGACTATGCG GGCGTCGCCG TCTTCGCGGC GACGGGAGCG
CTTTCGGCTT CCCGCAAGCA GCTCGACATT ATCGGTTATC TGTTTCTCGC TTCCGCGACC
GGCATTGGCG GCGGGACCAT TCGGGATCTC GTTCTCGGCG TGACGCCGGT GTTCTGGGTA
GTGAACCCCA ACTTCATCAT CGTCTGCGCG GCAGTGGCCA TCGCCGTCTT CCTGACGTCG
CACCTTCTCG AGTCACGCTA TCGCCTGCTC GTATGGCTCG ATGCGATGGG TCTTTCCGCC
TATTGCGTCA TGGGCGCGGC GAAGGGACTG GCTGCGACGG GTTCGCCGAT CGTCGCCCTC
GTCACGGGCA CTCTGACGGC AACCTTCGGC GGCGTCCTGC GTGATCTGCT GGCCGGAGAA
CCTTCCGTCC TGTTGCGGCC GGAGATCTAT GTGAGCGCCG CCCTCATCGG AGCCTCCGCC
TTCGTGCTCG CAAGCATGCT CGGATTGCCG CTGGCGGTGG CGTCCGCACT GGGTGTGCTC
ACGGCCTTTG CCGTGCGCGG CGGTGCGCTT CGATACGGGT GGATGCTGCC GACCGGGAAA
GCCGGTCCCG GCCGCGATCC GGACGACGTG ATGTGA
|
|---|
| Protein sequence | MPILEFLDYA GVAVFAATGA LSASRKQLDI IGYLFLASAT GIGGGTIRDL VLGVTPVFWV
VNPNFIIVCA AVAIAVFLTS HLLESRYRLL VWLDAMGLSA YCVMGAAKGL AATGSPIVAL
VTGTLTATFG GVLRDLLAGE PSVLLRPEIY VSAALIGASA FVLASMLGLP LAVASALGVL
TAFAVRGGAL RYGWMLPTGK AGPGRDPDDV M
|
|---|
| |