Gene Smed_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3450 
Symbol 
ID5324336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3659342 
End bp3659857 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content62% 
IMG OID640792400 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_001329103 
Protein GI150398636 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA GACAATCCAG CTTCAGCTAC GAGGAAATCC TGATCTGCGG CCGAGGCGAA 
ATGTTTGGCC CCGGCAACGC GCAGCTGCCG CTGCCGCCGA TGCTGATGTT CAATCGCATC
ACCGACATTT CGGAAACAGG CGGGCCCCAC GACAAGGGTT ACGTTCGCGC CGAGTTCGAC
ATTACGCCGG ACCTGTGGTT CTTTCCGTGT CACTTCATGG GCGATCCGGT CATGCCCGGC
TGCCTCGGCC TCGACGCCAT GTGGCAATTG ACCGGCTTCT TCCTGGGTTG GCTTGGGGAG
GCCGGCAAGG GCCGCGCCAT CTCCACGGGC GAGGTGAAGT TCACCGGCAT GGTGACGCCG
AAGACCAAGC TGGTAGAATA CGGCATCGAC TTCAAGCGCG TCATGCGCGG CCGCCTGGTC
CTCGGCATTG CCGACGGCTG GATGAAGGCC GATGGCGAAA CCATCTATAA GGCCACCGAC
CTCAGGGTCG GCCTCTTCCA GGAAAAGGCC GGCTGA
 
Protein sequence
MTTRQSSFSY EEILICGRGE MFGPGNAQLP LPPMLMFNRI TDISETGGPH DKGYVRAEFD 
ITPDLWFFPC HFMGDPVMPG CLGLDAMWQL TGFFLGWLGE AGKGRAISTG EVKFTGMVTP
KTKLVEYGID FKRVMRGRLV LGIADGWMKA DGETIYKATD LRVGLFQEKA G