Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3449 |
Symbol | |
ID | 5324335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3658073 |
End bp | 3659293 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792399 |
Product | 3-oxoacyl-(acyl carrier protein) synthase I |
Protein accession | YP_001329102 |
Protein GI | 150398635 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACGGG TTGTTGTAAC GGGCCTCGGG ATCGTTTCCT CGATCGGCAG CGATGCCGAC GAAGTCACCG CGTCGCTCCG CGATGCGCGT TCGGGCATCA CGTTTTCTCC GGATTTTGCC GAGCACGGCT TTAAATGCCA GGTCTGGGGA GCGCCTGCGC TCGACCCGAC AGATCTGGTC GACCGGCGCG CCATGCGCTT CCTCTCTCAG GGCGGAGCCT GGAACCATGT GGCGATGAAG CAGGCTATCG CGGATTCCGG ATTGGAAGCC GGCGACATCA CAAACGAACG CACCGGCATC ATAATGGGAT CGGGCGGCCC TTCGACGCGC ACGATCGTCG AAGCGGCGGA CATTACCCGC AAGAACAACA GCCCCAAGCG CATCGGCCCC TTCGCCGTGC CAAAGGCGAT GTCGTCCACG GCCTCCGCGA CCCTTGCGAC CTGGTTCCAG ATCCACGGCG TCAACTATTC CATCTCGTCG GCCTGCTCGA CCTCGGCACA CTGCATCGGC AATGCCGCAG AAATGATCCA GTGGGGCAAA CAGGACGTGA TGTTCGCCGG AGGTCACGAA GATCTCGACT GGACCATGTC AAATCTGTTC GACGCCATGG GCGCCATGTC TTCCAAGTAT AACGATACGC CGGCAATTGC TTCCCGTGCC TATGACGCGA ACCGCGACGG CTTCGTCATC GCCGGCGGTG CCGGTGTCCT CGTCCTGGAG GAACTGGAGC GTGCCAAGGC GCGCGGTGCG AAGATTTACG CCGAAATCGT CGGCTACGGC GCGACCTCGG ACGGATACGA CATGGTCGCC CCCTCCGGCG AAGGCGCCGC GCGCTGCATG CGCCAGGCGC TCGCCACGGT GAATGGCGAT GTCGACTACA TCAATACCCA CGGCACCTCC ACGCCGGTCG GCGATCAAAA GGAGATCGGC GCCATCCGCG AGGTCTTCGG TGAGAAGATG CCGCATATCC AGTCCACGAA ATCGCTGACC GGTCACTCAC TCGGCGCGGC TGGTGTACAG GAATCGATCT ACGGCCTCCT GATGATGCAG GCCGGCTTCA TCGGCGAAAG CGCTCACATC ACCGAGCTCG ACGCCGAATT CGAAGGCGTG CCGATCGTCC GCAAGCGCAT CGACAATGCC AGGATCGACA CGGTTCTTTC GAACTCCTTC GGCTTCGGCG GCACCAACGC GACGCTCGTC TTCCAGCGCT ATAACGGATA A
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Protein sequence | MRRVVVTGLG IVSSIGSDAD EVTASLRDAR SGITFSPDFA EHGFKCQVWG APALDPTDLV DRRAMRFLSQ GGAWNHVAMK QAIADSGLEA GDITNERTGI IMGSGGPSTR TIVEAADITR KNNSPKRIGP FAVPKAMSST ASATLATWFQ IHGVNYSISS ACSTSAHCIG NAAEMIQWGK QDVMFAGGHE DLDWTMSNLF DAMGAMSSKY NDTPAIASRA YDANRDGFVI AGGAGVLVLE ELERAKARGA KIYAEIVGYG ATSDGYDMVA PSGEGAARCM RQALATVNGD VDYINTHGTS TPVGDQKEIG AIREVFGEKM PHIQSTKSLT GHSLGAAGVQ ESIYGLLMMQ AGFIGESAHI TELDAEFEGV PIVRKRIDNA RIDTVLSNSF GFGGTNATLV FQRYNG
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