| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3446 |
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| Symbol | |
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| ID | 5324332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3653754 |
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| End bp | 3655898 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792396 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001329099 |
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| Protein GI | 150398632 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAGA CTCACAAGGT AGAAATCGAA TGGGCTGGGC GTCCGCTCAA GCTCGAAACC
GGAAAGATCG CGCGTCAGGC CGATGGTGCC GTTCTCGCGA CCTACGGCGA AACCGTCGTG
CTCGCCACGG TCGTTTCGGC CAAGGCACCG AAGCCCGGCC AGGATTTCTT CCCGCTCACC
GTCAACTACC AGGAAAAGAC CTACGCTGCC GGCAAGATTC CGGGCGGCTA TTTCAAGCGC
GAGGGCCGTC CCAGCGAAAA CGAAACGCTG GTGTCCCGCC TGATCGACCG TCCGATCCGC
CCGCTCTTCC CCGAAGGCTA CAAGAATGAC ACCCAGGTCA TCATCACGGT CATGCAGCAT
GATCTTGAGA ACAACCCGGA CGTCGTCGCC ATGGTTGCAG CTTCTGCTGC GTTGACGCTT
TCCGGCGTTC CCTTCATGGG CCCGGTCGGT GGTGCCCGCG TCGGCTACAT CAACGGCGAA
TACGTCCTCA ACCCGCATCT CGACGAAATG GACGAGTCGA CGCTCGACCT CGTCGTCGCC
GGCACACAGG ACGCCGTATT GATGGTTGAA TCCGAGGCCA AGGAGCTTTC GGAGGAGATC
ATGCTCGGCG CCGTCGTCTT CGGCCAGAAG GGCTTCCAGC CGGTCATCGA CGCAGTCATC
AGGCTTGCCG AAGTCGCCGC CAAGGAGCCG CGCGAGTTCG AGCCGGACGA CCATTCCGCT
CTCGAAAACG CCATGCTTTC GATCGCCGAA GAGGACCTGC GCAAGGCCTA CAAGATCACC
GAGAAGGCGC AGCGTTATGC AGCCGTCGAC GCGGTCAAGG CCAAGGTGAA GGAGCACTTC
CTTCCGGAAG GCGTCGAGAA CCCGGCTCAT ACGGCGGAAG AGATCGCCTC GGTCTTCAAG
CACCTGCAGG CCAAGATCGT TCGCTGGAAC ATCCTCGACA CCAAGAGCCG CATCGACGGC
CGCGATCTCG TCACGGTTCG TCCGATCGTT GCCGAAGTCG GCCTCCTGCC GCGTACGCAC
GGTTCGGCGC TCTTCACCCG CGGCGAGACT CAGGCGATCG TTGTCGCGAC GCTCGGCACC
GGAGAAGACG AGCAGTACGT CGATTCCTTG ACAGGCATGT ACAAGGAAAA CTTCATGCTG
CACTACAACT TCCCGCCCTA CTCGGTCGGC GAAACGGGCC GCATGGGTTC CCCGGGTCGC
CGCGAGATCG GCCACGGCAA GCTTGCCTGG CGGGCAATCC ATCCGATGCT GCCGACGGCG
GAACAGTTCC CCTATACGCT GCGGGTCGTT TCGGAAATCA CCGAATCCAA CGGCTCGTCC
TCGATGGCGA CCGTCTGCGG CACATCTCTC GCGCTGATGG ATGCCGGCGT TCCGCTGGCC
AAGCCCGTTG CCGGCATCGC CATGGGCCTG ATCAAGGAGG ACGACCGCTT CGCAGTCCTC
TCCGACATTC TCGGTGACGA GGATCATCTC GGCGACATGG ACTTCAAGGT CGCAGGCACC
GAAGCCGGCG TTACCTCGTT GCAGATGGAC ATCAAGATTG CCGGCATCAC CGAAGAGATC
ATGAAGGTCG CGCTCGACCA GGCGAAGCAC GGTCGCGTTC ACATTCTCGG CGAAATGGCC
AAGGCGATCT CCGAGAGCCG TGGGCAGCTC GGCGAGTTCG CGCCGCGCAT CGAAGTGATG
AACATTCCGG TCGACAAGAT CCGCGAAGTC ATCGGCTCGG GCGGCAAGGT CATCCGCGAA
ATCGTCGAGA AGACCGGTGC CAAGATCAAT ATCGACGACG ACGGCACGGT TAAGATCGCG
TCGGCTTCCG GCAAGGAGAT CGAGGCAGCC CGCAAGTGGA TCCACTCGAT CGTCGCCGAA
CCGGAAGTCG GCCAGGTCTA TGAAGGCACC GTCGTCAAGA CGGCCGATTT CGGCGCCTTC
GTGAACTTCT TCGGTGCACG CGATGGCCTC GTCCACATCT CTCAGCTCGC TTCCGAGCGC
GTTGCCAAGA CCACGGACGT CGTCAAGGAA GGCGACAAGG TCTGGGTCAA GCTGATGGGC
TTCGACGAGC GCGGCAAAGT GCGCCTTTCC ATGAAGGTCG TCGACCAGGC GACCGGCAAG
GAGATCGCTG CCGAGAAGAA GGACGGCGGC GAAGCCGCCG AATAA
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| Protein sequence | MFETHKVEIE WAGRPLKLET GKIARQADGA VLATYGETVV LATVVSAKAP KPGQDFFPLT
VNYQEKTYAA GKIPGGYFKR EGRPSENETL VSRLIDRPIR PLFPEGYKND TQVIITVMQH
DLENNPDVVA MVAASAALTL SGVPFMGPVG GARVGYINGE YVLNPHLDEM DESTLDLVVA
GTQDAVLMVE SEAKELSEEI MLGAVVFGQK GFQPVIDAVI RLAEVAAKEP REFEPDDHSA
LENAMLSIAE EDLRKAYKIT EKAQRYAAVD AVKAKVKEHF LPEGVENPAH TAEEIASVFK
HLQAKIVRWN ILDTKSRIDG RDLVTVRPIV AEVGLLPRTH GSALFTRGET QAIVVATLGT
GEDEQYVDSL TGMYKENFML HYNFPPYSVG ETGRMGSPGR REIGHGKLAW RAIHPMLPTA
EQFPYTLRVV SEITESNGSS SMATVCGTSL ALMDAGVPLA KPVAGIAMGL IKEDDRFAVL
SDILGDEDHL GDMDFKVAGT EAGVTSLQMD IKIAGITEEI MKVALDQAKH GRVHILGEMA
KAISESRGQL GEFAPRIEVM NIPVDKIREV IGSGGKVIRE IVEKTGAKIN IDDDGTVKIA
SASGKEIEAA RKWIHSIVAE PEVGQVYEGT VVKTADFGAF VNFFGARDGL VHISQLASER
VAKTTDVVKE GDKVWVKLMG FDERGKVRLS MKVVDQATGK EIAAEKKDGG EAAE
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