| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3443 |
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| Symbol | truB |
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| ID | 5324329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3650075 |
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| End bp | 3651007 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640792393 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001329096 |
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| Protein GI | 150398629 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGAC CCCGCAAACC AAAGGGCCGC CCGATTTCAG GATGGCTAAT CCTCGACAAG
CCTCTCGATT TCGGTTCGAC CGAGGCAGTA TCCAAGATCA AATGGCTGTT CAAGGCGCAG
AAGGCGGGCC ATGCCGGCAC CCTGGATCCG CTGGCGTCCG GAATGCTGCC CATCGCGCTC
GGCGATGCAA CGAAGACCGT GCCTTATGTC ATGGATGGCC GCAAGATCTA CGAATTCACG
GTCGCCTGGG GCGAGGAACG CTCAACGGAC GACCTCGAAG GGGAGGTCGT CCGCTCCTCC
GCGGACCGTC CGGCGGAAGA GGCGATCCGG GCTCTGCTGC CCAAATATAC CGGCGTGATC
GCACAGGTGC CGCCGCAGTT TTCGGCGATC AAGATCGGCG GCGAACGCGC CTATGATCTC
GCACGAGAGG GTGAAACCGT CGACATCCCG GCGCGTGAGG TGGAAGTCTT TCGTCTTTCG
CTCATCGGCT CCGCGCCAAG TCTCGCACAG TTCGAAATCG AATGCGGCAA GGGCACCTAT
GTCCGCTCGC TGGCCCGCGA CATGGGCCGT GATCTCGGTT GCTTCGGCCA TATCGCGTCG
CTGCGCCGAA CGTTCGTCGC TCCCTTCGGC GAGGAGGACA TGGTGCCGCT CGCCGATCTC
GTCGCGTTGG AGAAGATCGA GGACGAGGCG GAACGTCTCG CCGCGCTGGA CGAGCATCTG
ATCGATACCG GAGAGGCCTT GTCCGACCTT CCCCATATCG CCGTCAATGA CGACCAGGCG
CACCGGCTCC GAATGGGCAA CCCGATCATT CTGCGCGGAC GCGACGCGCC ACTGCCCACG
CCGGAGGCCT ATGCCACCGT ACAAGGCAAG CTTGTGGCGA TCGGCGAAAT CGCCGAAGGC
GAATTTCGGC CGAAGCGCGT TTTCGCAGGC TAG
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| Protein sequence | MSRPRKPKGR PISGWLILDK PLDFGSTEAV SKIKWLFKAQ KAGHAGTLDP LASGMLPIAL
GDATKTVPYV MDGRKIYEFT VAWGEERSTD DLEGEVVRSS ADRPAEEAIR ALLPKYTGVI
AQVPPQFSAI KIGGERAYDL AREGETVDIP AREVEVFRLS LIGSAPSLAQ FEIECGKGTY
VRSLARDMGR DLGCFGHIAS LRRTFVAPFG EEDMVPLADL VALEKIEDEA ERLAALDEHL
IDTGEALSDL PHIAVNDDQA HRLRMGNPII LRGRDAPLPT PEAYATVQGK LVAIGEIAEG
EFRPKRVFAG
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