| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3439 |
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| Symbol | nusA |
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| ID | 5324325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3644337 |
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| End bp | 3645995 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640792389 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001329092 |
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| Protein GI | 150398625 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.787039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGC AACAGACGGA GACAAGAGAC ATGGCAGTCA GTGCTAACCG GCTCGAACTT
CTGCAGATCG CAGATGCTGT GGCACGCGAA AAGGTGATCG ACCGCGAGAT CGTTCTGGCC
GCGATGGCGG ATGCGATCCA GAAGGCGGCT CGTTCGCGCT ACGGTTCGGA ATCGAACATC
CGCGCCGACA TCAATCCGAA GACCGGGGAA ATCCGTCTCC AGCGCCTCCT GGAAGTGGTC
GAAAAGGCGG AAGACTATTC GACTCAGATT CCGATCGAAC TCGCCCGCGA TCGCAATCCC
GATGCAAAGC TCGGCGATTT CATCGCCGAT CCGCTCCCGC CCATGGATTT TGGCCGCATC
GCCGCTCAGT CGGCCAAGCA GGTTATCGTG CAGAAGGTGC GCGAAGCCGA GCGCGACCGC
CAGTACGACG AGTTCAAGGA CCGTGTCGGC GAGATCGTCA ACGGCACCGT CAAGCGCGTC
GAATATGGCA ATGTCATCGT CGATCTCGGG CGCGGTGAAG GCATCATCCG GCGCGACGAG
ATGATCCCGC GCGAAAACAT GCGTTACGGC GACCGCGTCC GTGCCTTTGT CTACGACGTG
CGCCGCGAGC AACGCGGACC GCAGATATTC CTGTCGCGCA CCCATCCGCA GTTCATGGTG
AAGCTCTTCA CCATGGAGGT ACCGGAAATC TACGACGGCG TCATCCAGAT CAAGTCGGTT
GCCCGCGATC CGGGCTCGCG CGCCAAGATC GCCGTCGTCT CGAACGATTC GTCGATCGAT
CCGGTCGGCG CCTGCGTCGG CATGCGCGGC TCGCGCGTGC AGGCTGTCGT CGGTGAACTC
CAGGGCGAAA AGATCGATAT CATCCCGTGG TCGCCGGATC CGGCTTCCTT CATCGTCAAT
GCGCTGCAGC CGGCGGAAGT GGCGAAGGTC GTTCTAGACG AGGATGCGGA GCGTATCGAA
GTCGTGGTTC CGGACGAGCA GCTTTCGCTC GCCATCGGCC GCCGCGGCCA GAACGTCCGT
CTCGCCTCGC AGCTGACCGG ATGGGATATC GATATCCTCA CCGAACAGGA GGAGAGCGAG
CGCCGTCAGA AGGAATTCAA CGAGCGCACA CAGCTCTTCA TGGAAGCCCT GGACGTCGAC
GAGATGGTAG GCCAGGTGCT CGCCTCCGAA GGCTTTGCCC AGGTGGAAGA GCTCGCTTAT
GTCGATCTCG ACGAAATTGC CTCCATCGAG GGCTTCGACG AGGAAACGTC GAACGAGATC
CAGACCCGCG CCCGCGAATA TCTCGAAAAG ATCGAGGCGG AAATGGACGC CAAGCGCAAG
GAACTCGGTG TTGCCGACGA GCTGCGCACG ATCAATGGGC TCAACAGCCA GATGCTGGTC
GCTCTCGGCG AGGAAGGCAT CAAGACGATA GAGGACTTTG CCGGCTGCGC CGCCGACGAC
CTCGTAGGCT GGGTCGAACG CAAGGATGGT GAGACCAAGC GCTTCGAGGG AACGTTCTCG
AAGCTCGAGG TTACCCGGGA AGAGGCCGAA GCGATGATCG TGCAGGCTCG TCTCGCTGCC
GGCTGGATCA CCGAAGAGGA TCTGGCCAAA CAACAGGAGG AAGAGCCGGA ACAGGATGAG
ACGATCGAAG TCGCCGAAGG CGCGGATCAG GACGCCTGA
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| Protein sequence | MRLQQTETRD MAVSANRLEL LQIADAVARE KVIDREIVLA AMADAIQKAA RSRYGSESNI
RADINPKTGE IRLQRLLEVV EKAEDYSTQI PIELARDRNP DAKLGDFIAD PLPPMDFGRI
AAQSAKQVIV QKVREAERDR QYDEFKDRVG EIVNGTVKRV EYGNVIVDLG RGEGIIRRDE
MIPRENMRYG DRVRAFVYDV RREQRGPQIF LSRTHPQFMV KLFTMEVPEI YDGVIQIKSV
ARDPGSRAKI AVVSNDSSID PVGACVGMRG SRVQAVVGEL QGEKIDIIPW SPDPASFIVN
ALQPAEVAKV VLDEDAERIE VVVPDEQLSL AIGRRGQNVR LASQLTGWDI DILTEQEESE
RRQKEFNERT QLFMEALDVD EMVGQVLASE GFAQVEELAY VDLDEIASIE GFDEETSNEI
QTRAREYLEK IEAEMDAKRK ELGVADELRT INGLNSQMLV ALGEEGIKTI EDFAGCAADD
LVGWVERKDG ETKRFEGTFS KLEVTREEAE AMIVQARLAA GWITEEDLAK QQEEEPEQDE
TIEVAEGADQ DA
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