Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3431 |
Symbol | |
ID | 5324316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3635935 |
End bp | 3636339 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640792380 |
Product | histidine triad (HIT) protein |
Protein accession | YP_001329084 |
Protein GI | 150398617 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGACCT TCACGCTTGA CGAGCGACTT CAGCGCGACG GCCTGCCGAT CGGCACACTC GGTCTTTGCC AGCTGCGGCT GATGAATGAT CGCCGCTGGC CATGGCTGAT CCTCATACCC CAGCGCGCCG ACGTTTCGGA GGTCTTCGAA CTGACGCCGC TCGACCAGAC GATGCTGACC TTCGAGACCA ATCTGGTTGC GGCAGGCCTG AAAAAGGCGA CCGGCGCCGC GAAAATCAAT ATCGGCGCGC TGGGCAATAT CGTCCGGCAG CTGCACGTGC ATATCGTAGC CCGCCGTGAA GGTGATCCGA ACTGGCCGGG GCCCGTCTGG GGTTTCGGCA GGGCCGAGCC CTGGCCGGAG GAGGACCACA GGGCATTCGC AGCCAGCATC ATGGAAAATC TCTGA
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Protein sequence | MTTFTLDERL QRDGLPIGTL GLCQLRLMND RRWPWLILIP QRADVSEVFE LTPLDQTMLT FETNLVAAGL KKATGAAKIN IGALGNIVRQ LHVHIVARRE GDPNWPGPVW GFGRAEPWPE EDHRAFAASI MENL
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