Gene Smed_3431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3431 
Symbol 
ID5324316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3635935 
End bp3636339 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content63% 
IMG OID640792380 
Producthistidine triad (HIT) protein 
Protein accessionYP_001329084 
Protein GI150398617 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGACCT TCACGCTTGA CGAGCGACTT CAGCGCGACG GCCTGCCGAT CGGCACACTC 
GGTCTTTGCC AGCTGCGGCT GATGAATGAT CGCCGCTGGC CATGGCTGAT CCTCATACCC
CAGCGCGCCG ACGTTTCGGA GGTCTTCGAA CTGACGCCGC TCGACCAGAC GATGCTGACC
TTCGAGACCA ATCTGGTTGC GGCAGGCCTG AAAAAGGCGA CCGGCGCCGC GAAAATCAAT
ATCGGCGCGC TGGGCAATAT CGTCCGGCAG CTGCACGTGC ATATCGTAGC CCGCCGTGAA
GGTGATCCGA ACTGGCCGGG GCCCGTCTGG GGTTTCGGCA GGGCCGAGCC CTGGCCGGAG
GAGGACCACA GGGCATTCGC AGCCAGCATC ATGGAAAATC TCTGA
 
Protein sequence
MTTFTLDERL QRDGLPIGTL GLCQLRLMND RRWPWLILIP QRADVSEVFE LTPLDQTMLT 
FETNLVAAGL KKATGAAKIN IGALGNIVRQ LHVHIVARRE GDPNWPGPVW GFGRAEPWPE
EDHRAFAASI MENL