| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3425 |
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| Symbol | |
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| ID | 5324310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3630346 |
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| End bp | 3631443 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640792374 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001329078 |
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| Protein GI | 150398611 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGGTG CCGGTGAGCA GACTTTCCTG TTCGAGCAAA ACGCGAACCC CTTGGCAACG
AGCGAGCGCG AGGCTCTGCT TGCTAATCCC GGCTTCGGGC GCGTGTTCAC CGACCATATG
GTGACGATCC GCTATTGCGA AAGCCGCGGC TGGCACGATG CGAAGGTTGG CCCGAGAAAA
GCCTTTGATC TCGATCCGTC CACACTCGTG CTGCACTACG CGCAGGAGAT CTTCGAGGGC
ATGAAGGCCT ATGGGCTGCC CGGCGGCGGC GCCACGCTGT TTCGTCCCGA TGCGAATGCG
CGGCGTTTCC GCAACTCCGC ACTTCGGCTC GCAATGGCGC CCCTGCCGGA GGAGCTCTTC
ATCCGATCGG TACGCGAACT GGTGCGTGTC GACCGGGACT GGATACCGGC CGCTGAAGGA
GCCGCACTCT ATCTCCGGCC GTTCATGATT GCCACGGAGG TACTGCTTGG GGTGAAGCCT
TCGGCCGAAT ACCTCTACTG CGTCATTGCT TCCTCTGTCG GTTCCTACTT CAAGGGTGGC
GCTCCAGCGG TAACCATATG GGTTTCGGAG AACTTCACGC GGGCAGCGCC CGGCGGCACC
GGAGAGGCAA AATGCGGCGG CAACTATGCC GCAAGCCTCG CGGCTCAGGC CGAGGCGATG
CAGGAGGGCT GCGAACAGGT GGTGTTCCTG GACGCGGTGG AACGCCGCTT TGTCGAAGAA
CTCGGCGGCA TGAACGTCTT CTTCGTCTTC CGGGACGGCT CATTGCAGAC GCCTCCGCTC
ACCGGCACCA TTCTCCCGGG CATCACGCGC GATTCGCTGA TCACGCTCGC CCGCGATATG
GGGATGACGG TGCGTGAAGA ACCCTATGCG ATCGATCAGT GGCAGGCGGA TGCGGAAAGC
GGCCGTCTCA CCGAAGCCTT TGCCTGCGGG ACGGCGGCTG TTGTGACCCC GATCGGCAAG
GTCAAGGGCC GCGAGCACAG CTTCACCATC GGTGACGGTG GTGCCGGTCC GGTCGCAAAC
CGCCTGAAGG CGGCACTGCT CGATATCCAG AACGGCCGCG CGCCGGACAG GCATGGCTGG
CTCGACCGGC TGTTCTAA
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| Protein sequence | MTGAGEQTFL FEQNANPLAT SEREALLANP GFGRVFTDHM VTIRYCESRG WHDAKVGPRK
AFDLDPSTLV LHYAQEIFEG MKAYGLPGGG ATLFRPDANA RRFRNSALRL AMAPLPEELF
IRSVRELVRV DRDWIPAAEG AALYLRPFMI ATEVLLGVKP SAEYLYCVIA SSVGSYFKGG
APAVTIWVSE NFTRAAPGGT GEAKCGGNYA ASLAAQAEAM QEGCEQVVFL DAVERRFVEE
LGGMNVFFVF RDGSLQTPPL TGTILPGITR DSLITLARDM GMTVREEPYA IDQWQADAES
GRLTEAFACG TAAVVTPIGK VKGREHSFTI GDGGAGPVAN RLKAALLDIQ NGRAPDRHGW
LDRLF
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