Gene Smed_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3417 
Symbol 
ID5324301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3624476 
End bp3625129 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content62% 
IMG OID640792368 
Productmethionine sulfoxide reductase A 
Protein accessionYP_001329073 
Protein GI150398606 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTGA TCGATATGTT CAACAAGAAG ACCATCCTGC CCGATGCGGC GACCGCGCTG 
GCCGGCCGGG AAGGGGAAAT CTCGACCGCA GCCGACCACT TCGTCTCCGG CCGGCCGCTC
AAGGGCCCCT ACCCGGACGG CATGAAGAAG GTGCTTTTCG GCATGGGCTG CTTCTGGGGA
GCGGAACGTC TTCTGTGGGA GATCCCGGGC GTCTACGTGA CGGCAGCCGG CTATTCCGGC
GGTCTCACGC CCAATCCGAC CTATCAGGAG ACGACGACGG GGCTGACCGG CCACACCGAG
GTGGTGCTCG TGGTCTACGA TCCGGCCAGA GTTTCGTTTC AGCGCCTGCT GAAGACATTC
TTCGAGGAGC ACGACCCGAC CCAGGGCATG CGCCAGGGAA ACGATGTCGG CACGACCTAT
CGTTCGGCCA TCTATGTCTA TGACGAGGAG CAGCTTGCCG AGGCGAATGC CGCGCGAAAC
GCTTTCCGGA AAGCTCTGAA GGCGTACAAG CACGATCGCG AGATCACCAC CGAGATCGCG
ATGGCCGGAC CATTCTATTT CGCCGAAGAA TATCACCAGC AATATCTCGC CAAGAATCCG
GACGGCTATT GCGGGCTGCG CGGTACCGGC GTCAGCTGCC CGATCGGCGC CTGA
 
Protein sequence
MFLIDMFNKK TILPDAATAL AGREGEISTA ADHFVSGRPL KGPYPDGMKK VLFGMGCFWG 
AERLLWEIPG VYVTAAGYSG GLTPNPTYQE TTTGLTGHTE VVLVVYDPAR VSFQRLLKTF
FEEHDPTQGM RQGNDVGTTY RSAIYVYDEE QLAEANAARN AFRKALKAYK HDREITTEIA
MAGPFYFAEE YHQQYLAKNP DGYCGLRGTG VSCPIGA