Gene Smed_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3414 
Symbol 
ID5324298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3621988 
End bp3622740 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content63% 
IMG OID640792365 
ProductCysZ-like protein 
Protein accessionYP_001329070 
Protein GI150398603 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.585186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTCG ATGCGGCGCG CCTTGCCTTC GCCAATCTCT TTGCGACGGA GACGCGCACG 
GTCTTCTGGA AGGTCATTGG GTTGACGTTG CTGGCGCTCG TCGCACTCTG GTTCGCGCTG
CGCGAAGTTT TCGTCTGGCT TGCTCTGCCC TGGATCGATG CACTCATGCC GGGCACACCC
GACTGGGCGG GATGGCTCAC TTTCGTTGTC GGATTATTCG CAAGTCTCGG CCTCGCACTC
GCACTGGCGC TGCTGCTGGC GCCGGTGACG GCGCTGATTG CCGGCTTCTT TCTCGACGAT
GTGGCCGAGG TGGTCGAGAA GCGTGATTAT CCCGCCGAGG CGCCCGGCAC GCCGCTGCCT
CTGGTAGAGG CGATCACCGG TTCGGCGAAA TTCCTCGGAG TCGTCGTTCT CGGCAATATC
GTCGCGTTGT TCCTGTTGTT GGTGCCGGGC GTCAATATCG TCGCCTTCTT CCTCGTCAAC
GGCTATCTGC TCGGCCGCGA ATTCTTCGAG TTCGCCGCCA TGCGCCATCG TCCGCCTGCG
GAGGCGCGCC TCTTCCGCGC CAAGCATCGC TCGACGGTGT TTCTCGCCGG CCTCTTGCTG
GCGGCGTTCC TTGCCGTGCC TCTGCTTAAT CTGCTGACGC CGCTCTTTGC CGCGGGGATG
ATGGTACACC TGCACAAGAT GCTTTCAACG CGAGACCCCG ACTTTGCGGG CACCGCAACT
GCGGGTGCGC GGGGATTGAA GTCGACGGCA TGA
 
Protein sequence
MIFDAARLAF ANLFATETRT VFWKVIGLTL LALVALWFAL REVFVWLALP WIDALMPGTP 
DWAGWLTFVV GLFASLGLAL ALALLLAPVT ALIAGFFLDD VAEVVEKRDY PAEAPGTPLP
LVEAITGSAK FLGVVVLGNI VALFLLLVPG VNIVAFFLVN GYLLGREFFE FAAMRHRPPA
EARLFRAKHR STVFLAGLLL AAFLAVPLLN LLTPLFAAGM MVHLHKMLST RDPDFAGTAT
AGARGLKSTA