Gene Smed_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3409 
Symbol 
ID5324293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3616361 
End bp3617386 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content66% 
IMG OID640792360 
Productglutamine--fructose-6-phosphate transaminase (isomerizing) 
Protein accessionYP_001329065 
Protein GI150398598 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2222] Predicted phosphosugar isomerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.786046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGA CCAACATGCG GCGAGAAATC GACGAGATTC CCGAGGCCGC CGCCCGGCTG 
CTGGAGCACT CGGCCGCGGC GCTGAGCGAA GCCGGAGCGG CTCTTCGTGC CAAGGATCCG
GCCTTTCTGG TGACGATCGC CCGAGGATCC TCCGATCATG CCGCGCTGTT TTTGAAATAC
GCGATCGAGC TCACGACAGG ACGGCCCGTC GCATCGCTCG GGCCGTCGCT GGCATCGATC
TACGGCGCCG ATCTGAAACT CGGCGGTGCG GCGGCGATTG CGATCTCGCA GTCCGGAAAG
AGCCCGGACA TCGTTGCCAT GGCCGAAGCC GCGACGCGCG CAGGCGCCGT TTCGATCGCG
CTGACGAACA CGTTGCCTTC GCCGATCGCG GAAGCCTGCA CTCACCCGCT CGACATTCTC
GCAGGGCCCG AAATCGCCGT TGCGGCGACC AAGTCCTATG TCAACTCGAT CGTCGCGGGT
CTTGCGGTTC TCGGCGAATG GACCGGTGAC GGGGCCCTGA AGCGCGCGGT CGCCGATCTC
CCGAACCAGT TCGCCAAGGC GGTGAAGCTC GACTGGCAGG ATTTTGCCCG AGACCTCGGA
GAAGCCGAAT CGCTCTATGT GCTGGGCCGC GGTCCGGCGC TCGCGATCGC CAGCGAAGCG
GCGCTGAAGT TCAAGGAGAC GTCCGGCATG CATGCCGAGG CCTATTCTGC CGCGGAAGTG
TTGCACGGCC CGGTGGCGCT GGTCGGAGCC CGGTTCCCGG TTCTGGTGCT GGCTGCCCGC
GACGCGGCAG AGACCTCGGT GGCGGGCATC GCCGACGGCA TGAGTGCCAA GGGCGCGGTC
GTACACGTGA CGTCCGCCCG GGCACACGAC GCCAAGCGCC TGCCCTTCGT CGAGACCGGG
CACCCTCTGA CCGACGCATT GGCACTGATC CTGCCGTTCT ATGGCTTCGT CGAGGCCTGG
TCCCGCTCTC GTGGCCTCGA TCCCGACGCC CCGGAAAACC TCAAGAAGGT GACGGAAACA
CGATGA
 
Protein sequence
MMQTNMRREI DEIPEAAARL LEHSAAALSE AGAALRAKDP AFLVTIARGS SDHAALFLKY 
AIELTTGRPV ASLGPSLASI YGADLKLGGA AAIAISQSGK SPDIVAMAEA ATRAGAVSIA
LTNTLPSPIA EACTHPLDIL AGPEIAVAAT KSYVNSIVAG LAVLGEWTGD GALKRAVADL
PNQFAKAVKL DWQDFARDLG EAESLYVLGR GPALAIASEA ALKFKETSGM HAEAYSAAEV
LHGPVALVGA RFPVLVLAAR DAAETSVAGI ADGMSAKGAV VHVTSARAHD AKRLPFVETG
HPLTDALALI LPFYGFVEAW SRSRGLDPDA PENLKKVTET R