Gene Smed_3387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3387 
Symbol 
ID5324271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3590494 
End bp3590925 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content66% 
IMG OID640792338 
Productpyrimidine dimer DNA glycosylase 
Protein accessionYP_001329043 
Protein GI150398576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCAGAA TCAATTGCAT TCCGCCCTCG GAGCTGAGCG GCCCGCATCT CGTCGCCGAA 
TATCGCGAGC TGCCGCGCAT CTTTGCGCTT GTCCGCGGGG CAATCGCCCG CGGCGAGGAG
CCGAACGACC GCCGCAATCC GGAGTTCTAT ACCCTCGGCA AGGGGCATGT CCGCTTCTTC
TACAGCCGCC TCGGCTATCT GGCTGAGCGC CAGGCCGCGC TGATCGCGGA AATGCAGCGC
CGTGGCTATA TGCCGTCATT CCTGGATCCG AACGGGTTGC TCGAGGGGAT TCCCCCGGAA
TGGTGCAATG AATGGGAGCC GACGCCGGAC GCGATGGCTC TCAACCGGGA GCGCATCAGC
GAACGGGTAA GCCAGGCGGC TCTGCGGATC ACCACCGCGC CGGCTGGGGA CCTGCCAGGG
GCAGAGGGCT GA
 
Protein sequence
MTRINCIPPS ELSGPHLVAE YRELPRIFAL VRGAIARGEE PNDRRNPEFY TLGKGHVRFF 
YSRLGYLAER QAALIAEMQR RGYMPSFLDP NGLLEGIPPE WCNEWEPTPD AMALNRERIS
ERVSQAALRI TTAPAGDLPG AEG