Gene Smed_3374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3374 
Symbol 
ID5324258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3576240 
End bp3576737 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content61% 
IMG OID640792325 
Producthypothetical protein 
Protein accessionYP_001329030 
Protein GI150398563 
COG category[S] Function unknown 
COG ID[COG5488] Integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG GCAACGCCGC GCAAAACTTC AACGACGAGC CGATCTTTGC GGCCGAACTG 
ACCCCTTACC GCTCCCTCGG ATCGAAAGGG TTCAAGGTTT TCCTGTTGAT CGCCGGCATC
ATGAGCCTGA TCCACATAGC CGTGTTCCTG CTCATCGGCG CCTGGCCGAT CGTCTTTTTC
TTCGGCCTCG ATTTCATCCT GCTCGCCGGC GCTTTCCGGC TGAACTACCA TGCGGCACGC
GCCCGCGAGG AAGTCAGCGT GTCCCGCACG GACGTGTCCG TCAGGAAATT TGCGCCCTCC
GGAAGGATGG TCGAGCATCG CTTCAACACT TTCTGGACGC GCTTCAGCAT CAAGCGCCAT
CAGGAGATCG GCATCGTGTC GATGAATATC AGCGGCGGCG GACGTCAGAC GGATGTCGGT
TCCTTCCTCA ACCGCGACGA CCGGGAAACC TTCGCCGTCG CCTTCTCGCG GGCACTGGCG
ACCGCCAGGT CCCGATGA
 
Protein sequence
MIEGNAAQNF NDEPIFAAEL TPYRSLGSKG FKVFLLIAGI MSLIHIAVFL LIGAWPIVFF 
FGLDFILLAG AFRLNYHAAR AREEVSVSRT DVSVRKFAPS GRMVEHRFNT FWTRFSIKRH
QEIGIVSMNI SGGGRQTDVG SFLNRDDRET FAVAFSRALA TARSR