Gene Smed_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3372 
Symbol 
ID5324256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3574506 
End bp3575141 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content63% 
IMG OID640792323 
Productphosphoglyceromutase 
Protein accessionYP_001329028 
Protein GI150398561 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0588] Phosphoglycerate mutase 1 
TIGRFAM ID[TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA CACTCGTCCT TGTCCGGCAC GGCCAGAGCG ACTGGAACCT GAAGAACCTC 
TTCACCGGCT GGCGCGATCC CGACCTGACC GAGCTCGGCA TCGAGGAGGC AATGGCCGGC
GGCAAGGCGC TTGCCGACTA CGGCATCAAA TTCGACATCG CCTTCACCTC GGATCTCATC
CGTGCCCAGC GCACCTGCCA GCTGGTGCTG GACGCTGTCG ATCAGTCATC GCTCGAAACG
ATCCGCGACC AGGCTTTGAA CGAGCGCGAC TACGGTGATC TTTCCGGCCT CAACAAAGAC
GATGCACGGG CGAAATGGGG CGAGGAACAG GTCCACATCT GGCGCCGATC CTACGACGTG
CCGCCGCCGG GCGGCGAGAG CCTGCGCGAC ACCGGCGCTC GCGTCTGGCC TTACTATCTC
ACCGACATCC TGCCTCGCGT GCTTTCCGGT GAAAAGGTTC TGGTCGCCGC CCACGGCAAC
TCGCTGCGCT CGCTGGTGAT GGTGCTCGAC GGCTTGACCA AGGAGCAGAT CCTCAAGCTC
AACCTCGCGA CCGGGGTGCC AATGGTCTAC AAGCTCAACG CGGATTCCAC CGTCGCATCG
AAGGAAGTGC TCGGAGATAT GTCAGCGGCG CATTGA
 
Protein sequence
MSGTLVLVRH GQSDWNLKNL FTGWRDPDLT ELGIEEAMAG GKALADYGIK FDIAFTSDLI 
RAQRTCQLVL DAVDQSSLET IRDQALNERD YGDLSGLNKD DARAKWGEEQ VHIWRRSYDV
PPPGGESLRD TGARVWPYYL TDILPRVLSG EKVLVAAHGN SLRSLVMVLD GLTKEQILKL
NLATGVPMVY KLNADSTVAS KEVLGDMSAA H