| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3370 |
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| Symbol | |
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| ID | 5324254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3571820 |
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| End bp | 3573625 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792321 |
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| Product | ABC transporter related |
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| Protein accession | YP_001329026 |
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| Protein GI | 150398559 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGACA GGGATAGAAA CAAGCGCGCA GTCGATTCCG AGACGATCAC CGGAATCCTC
AAGCGCGTCA TCGCCGAAAA CGGCCGTGAT CACATCCGGG GCTATGCCTT CGCAATCGCA
TGCCTGATCG TCGTGGCAGC AACGACGGGC TTCACCGCCT GGATCATGGA AGCCGTGGTC
AACGAGGCTT TCGCCAACAG ACGGGCCGAT ATCGTTCTCC TGATCTGCGG CGCGATCTTC
GCCGCCTTCG TCCTCCGGGG CCTTGCGACC TACGGGCAGG CGGTCGCCCT TTCCAAGATC
GGCAATAATA TCGTCGCGCG CTATCAGCGC CGGCTCTACG CGCATCTGAT GGCGCTCAGC
GTCGGCTATT TCCACGAGCA CCGCTCGGCC CAGCTCGCCG CCAAGGTGAG CCAGAACGTC
AGCGGCATCC GCGACGTGCT CAACATGACG GTCACGTCGA TCGCCCGTGA CCTTCTGACA
CTGATCGGCC TGATCGTGGT CATGTTCAGC AAGGATTGGC TCCTCTCCCT GATCGTCTTC
TTCGTCGCGC CGCCACTGCT CTTCGGCCTG CGTTACATTT CGCGGCGCCT GCGGTTGGCG
ACACGGGAGG CGGTCGAGGT CAACAGCCGG GTTCTCGGCG CGATGCAGGA GACCATCCAG
GGCATCACCA TCGTCAAAGC ATTCACGATG GAGAACGAAT TGCGGCGCAA AGTCGAGTCG
ATCATCGACC GCGCAGAGAA CCGCGCCAAC CGCATCGCGC GCCTGAGCGA ACGCACCGCG
CCGATGACGG AGACCTTCGC CGGCCTCGCA ATATCCAGCG TGCTCGCCTA TGCCGCATTC
CGCACGATTT ATCACAATGT CCCGCCCGGC GCGTTCTTCG CCTTCGTCAC CGCTCTGCTG
ATGGCCTATG ATCCGGCCCG GCGTCTCGCG CGTCTGCAGG TGTCCATGGA ACGGGCCGCC
GTCAATGCCC GTATGATCTA CGAAATACTC GACACGGTGC CGCACCAGCG CGACCGTGCC
GACGCGGGCG AACTGAAGCT GGGCGAGGCG GCCGTCGAAC TGCGTGACGT GCGCTTCGCC
TATGGCAATG GCGACGAAAT CCTCAAAGGG GTCAGCTTCC GTGCCGAGGG CGGAAAGACG
ACCGCGCTGG TCGGCCCCTC AGGCGCCGGA AAATCGACGA TCATCAGCTT GATCCCCCGC
TTCTACGATC CGGTTGCGGG CGAGATCCTG ATCGATGGGC AGAATATCGC CGGCGTCACC
AAACAGTCGC TCCGCCGCGG CCTCGCCTAC GTCTCTCAGC AGCCCTATCT CTTCGAAGGC
TCCATTCGCG ACAACATCCG CTATGGCCGG CCCGATGCGA CCGATGCGGA AATCGAGGAA
GCGGCACGGC TTGCCTATGC GCATGATTTT ATCATGGCGC AGCCCCAGGG CTACGACACA
CCGGTCGGCG AGCATGGCGT GACGCTTTCC GGCGGTCAGC GCCAACGCCT GTCGATCGCC
CGCGCGCTCG TGCGCAACGC GCCCGTCCTG CTTCTGGACG AGGCCACATC GGCGCTCGAC
ACCGAATCGG AAGCGGCCGT CCAGAAGGCA CTCGAAGAGG CGATGAGCGG CCGGACCGTC
ATCGTCATCG CGCATAGGCT CTCCACCGTC GTCAATGCCG ACAAGATCGT CGTGATGAAG
GACGGCACGG TCGTGGAAGA GGGCACCCAT GAGGAGCTTG CGCGGCGTCC GGACGGCCTT
TACGCTCGCC TCCACAATCT CCAGGGCAGC GGAGCGGATA CGGCAGCCGA GGCCCGGATC
CTCTAG
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| Protein sequence | MSDRDRNKRA VDSETITGIL KRVIAENGRD HIRGYAFAIA CLIVVAATTG FTAWIMEAVV
NEAFANRRAD IVLLICGAIF AAFVLRGLAT YGQAVALSKI GNNIVARYQR RLYAHLMALS
VGYFHEHRSA QLAAKVSQNV SGIRDVLNMT VTSIARDLLT LIGLIVVMFS KDWLLSLIVF
FVAPPLLFGL RYISRRLRLA TREAVEVNSR VLGAMQETIQ GITIVKAFTM ENELRRKVES
IIDRAENRAN RIARLSERTA PMTETFAGLA ISSVLAYAAF RTIYHNVPPG AFFAFVTALL
MAYDPARRLA RLQVSMERAA VNARMIYEIL DTVPHQRDRA DAGELKLGEA AVELRDVRFA
YGNGDEILKG VSFRAEGGKT TALVGPSGAG KSTIISLIPR FYDPVAGEIL IDGQNIAGVT
KQSLRRGLAY VSQQPYLFEG SIRDNIRYGR PDATDAEIEE AARLAYAHDF IMAQPQGYDT
PVGEHGVTLS GGQRQRLSIA RALVRNAPVL LLDEATSALD TESEAAVQKA LEEAMSGRTV
IVIAHRLSTV VNADKIVVMK DGTVVEEGTH EELARRPDGL YARLHNLQGS GADTAAEARI
L
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