| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3366 |
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| Symbol | |
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| ID | 5324250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3566586 |
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| End bp | 3568445 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640792317 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001329022 |
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| Protein GI | 150398555 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAACT TCTGCAGGAC CATGAAGCCA GGCCTTGCGG CCTCGCTTCT GACAGCAGCG
CTTCTCCTCC TCCCTGCTGC ATCGAATGCC GAGGAACAGC CCGCCTGGCG CCACGCTACC
TCGTCGATCG GCGAGCCCAA ATACAAGACG GATTTTGCGC GTTTCAACTA CGTCAATCCC
GATGCGCCAA AAGGCGGAGA GCTACAGCTT TCGGAGAACG GGACGTTCGA CTCCTTCAAT
CCCATCCTCG CCAAGGGCGA GGTGGCTACG GGCGTCTCTT CGCTGGTCTT CGACACACTC
CTGATGTCGT CCGAGGACGA GATCACCACC TCCTACGGCC TGCTTGCAGA GGGCGTTTCC
TATCCGGCCG ATATTTCCTC CGCCACTTTT CGCCTGAGGG CAGAAGCCAG ATGGGCCGAC
GGCAGACCGG TGAGACCGGA GGATGTCATC TTCTCCTTCG ATAGGGTGAA GGAGCACAAT
CCGCTCTTTT CCAACTACTA CCGTCACGTG GTTTCAGCGG AAAAGACCGG CGAACGGGAC
GTTACCTTCC GGTTCGACGA GAAGAACAAT CTCGAACTTC CGAACATTCT CGGCCAGTTT
CCCATCCTGC CGAAGCACTG GTGGGAAGGT CAGGACGCAG AAGGCAAGAA GCGCGATATC
GGACGCACGA CACTGGAACC GGTCATGGGC TCCGGTCCTT ACAAGATCGC CGCTTTCCAG
CCTGGCGGCT CCATCCGTTT CGAATTGCGC GACGACTATT GGGGCAAGGA TCTCAATGTG
AATGTCGGCA GGTACAATTT CCGCACGATC AACTACGTTT TCTTCAGTGA CCGAAGCGTG
GAGTTCGAAG CCTTCCGTGC CGGCAATGTC CATTTCTACC GGGACAACAG CGCGAGCCAC
TGGGCCACGG CCTACGACTT TCCGGCAATG AAGGACGGAC GGGTGATCCG CGAGGAAATC
GAGAACCCGC TGCGCGCAAC CGGCGTGATG CAGGCCTTCG TACCCAATCT GCGTCGGGAA
AAATTCAAGG ATCAGCGGGT ACGCGAAGCG TTGAACTACG CCTTCGACTT CGAAGACCTG
AATCGCAGCC TCGCCCACAA TGCGTATCAG CGCGTCGACA GTTATTTCTG GGGCACCGAG
CTTGCCTCTT CCGGTCTGCC CGAGGGGCGC GAAAAGGAGA TCCTCGAGGA ACTGAAGGAC
AAGGTCCCCG CCGCCGTTTT CGACAAGCCC TACAAGAATC CCGTCAACGG CGATCCGCAG
AAGGTACGCG ATAACTTGCG CAAGTCGCTC TCTCTCTTCA AGGAAGCGGG TTACGAACTC
AAGGGCAGCC GATTGGTGAA CTCGAAGACC GGCGAGCCGT TCCGCTTCGA GATCCTTCTG
CCCAATCCCT CACTCGAGCG TACGGTTACG CCCTTCGTGA ACAGCGTGAG GAAAATCGGC
ATAGATGCTC GCATTCGCAC GGTCGACGAC TCGCAATATA CAAATCGCGT CAGAAGCTTC
GACTATGACA TGATCTACGG CGTCTGGGCG CAGACTCTGG TGCCCGGCAA CGAACAGAGC
GATTACTGGG GCTCGGCGTC GGTTGACCGG CCGGGATCCA TGAACTATGC CGGTATCGCC
GATCCGGCCA TCGACGAACT CATCCGGAAA ATCATCTTCG CGCCGAACCG CGAGGAACTC
GTCGCGACGA CACGGGCGCT CGACCGCGTC CTTCTCGCCC ATCATTACGT CGTGCCTCTT
TTCTATTCGA AGGCCTACCG CATCGCCTAT TGGAGCCACC TGGCCCGCCC GGAGGAGCTG
CCCTATTACG GGATGGATTT CCCGGCTGCG TGGTGGTCGA AGAGCGCCGC TGCCAAATGA
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| Protein sequence | MPNFCRTMKP GLAASLLTAA LLLLPAASNA EEQPAWRHAT SSIGEPKYKT DFARFNYVNP
DAPKGGELQL SENGTFDSFN PILAKGEVAT GVSSLVFDTL LMSSEDEITT SYGLLAEGVS
YPADISSATF RLRAEARWAD GRPVRPEDVI FSFDRVKEHN PLFSNYYRHV VSAEKTGERD
VTFRFDEKNN LELPNILGQF PILPKHWWEG QDAEGKKRDI GRTTLEPVMG SGPYKIAAFQ
PGGSIRFELR DDYWGKDLNV NVGRYNFRTI NYVFFSDRSV EFEAFRAGNV HFYRDNSASH
WATAYDFPAM KDGRVIREEI ENPLRATGVM QAFVPNLRRE KFKDQRVREA LNYAFDFEDL
NRSLAHNAYQ RVDSYFWGTE LASSGLPEGR EKEILEELKD KVPAAVFDKP YKNPVNGDPQ
KVRDNLRKSL SLFKEAGYEL KGSRLVNSKT GEPFRFEILL PNPSLERTVT PFVNSVRKIG
IDARIRTVDD SQYTNRVRSF DYDMIYGVWA QTLVPGNEQS DYWGSASVDR PGSMNYAGIA
DPAIDELIRK IIFAPNREEL VATTRALDRV LLAHHYVVPL FYSKAYRIAY WSHLARPEEL
PYYGMDFPAA WWSKSAAAK
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