| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3363 |
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| Symbol | |
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| ID | 5324247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3562556 |
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| End bp | 3564184 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792314 |
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| Product | ABC transporter related |
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| Protein accession | YP_001329019 |
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| Protein GI | 150398552 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA CCATCCTCTC CGTGCGCGAC CTCTCCGTCG CCTTTCACCA GGGCGGCGAA
ACCTCGCTCG CCGTCGATCG TATCTCGTTC GACATCAAGC GAGGCGAGAC CGTCGCTCTT
GTCGGTGAGT CGGGTTCCGG GAAATCGGTC TCGGCCAACT CCATACTGAG GCTGCTTCCC
TATCCGGCTG CAAGCCATCC GAGCGGCGAG ATCGTCTTCA ACGGGAAAGA TCTCCTGAAG
GTGGGCGAGG ACGAACTCAG GCACGTCCGC GGCAACGACG TGACCATGAT CTTCCAGGAG
CCGATGACAT CGCTCAATCC GCTGCATACG ATCGAGCAGC AGATCGGCGA AATCCTGGAA
ATCCACCAGA ACCTGAAGGG TGCCGCCGCC CGCGCGAGAA CGCTGGAGCT CCTCGATCAG
GTCGGAATCC GCGAAGCGGA GAAGCGCCTC GGCGCCTATC CGCACCAGCT CTCCGGCGGT
CAGCGCCAGC GCGTGATGAT CGCGATGGCG CTCGCCAACC GGCCGGAGCT CTTGATCGCC
GACGAACCGA CGACGGCGCT CGACGTGACG GTGCAAGCGC AGATCCTCGA GCTTTTGAAG
TCGCTCAAGG ACGAGCACGG CATGTCCATG CTGTTCATCA CCCACGACCT CGGCATCGTC
CGCAAGATCG CCGATCGGGT CTGCGTCATG ACCAAGGGCA AGATCGTCGA AACCGGACCG
ACTGCCGAGA TTTTCGCCAA TCCTCAGCAC GACTATACCC GGCATCTGCT TGCCTCCGAA
CCCCGGGGCG AACCGCCTCC CTCCGACACG TCGAGCCCGA TCGTCGTGGA AGCGAGCGGC
ATGAAGGTCT GGTTTCCGAT CAAAGCGGGT TTCCTGCGGC GCGTGGTCGA TCACGTCAAG
GCGGTGGACG GCATCGATCT GACGCTCCGT GCCGGCCAGA CGCTTGGCGT GGTCGGCGAG
TCGGGTTCCG GCAAGACGAC GCTGGGCCTG GCGCTGACGC GGCTGATCTC GTCCAAGGGC
CGGATCGCCT TCGTCGGGGA GAACATCGAC GCCCATAGTT TCCGCGAGAT GCGTCCGCTC
CGAAATCGGA TGCAGGTGGT GTTCCAGGAC CCTTACGGGT CGCTCAGCCC GCGCATGTCG
ATCGCCGACA TCATCGGCGA GGGCTTGAAA ATCCACGAGA AAGCACTGAC GGATAACGAA
CGCGACGGGC GCGTCGCCGC CGCTTTGGAA GAGGTCGGCC TCGATCCCGC GACGCGCTGG
CGCTATCCGC ACGAGTTCTC CGGCGGCCAG CGCCAGCGCA TTGCCATCGC CCGGGCGATG
GTGCTGAAAC CGCAATTCGT CATGCTCGAC GAGCCCACTT CCGCGCTCGA CATGAGCGTG
CAGGCCCAGG TCGTCGATCT CCTGCGCGAC CTTCAGCGCA AGCACAATCT CGCTTACCTT
TTCATCAGCC ACGATCTCAG GGTCGTGCGC GCGCTCGCAA ACGAGGTGAT CGTCATGCGG
CTCGGCAAGG TCGTGGAGCA GGGACCCGCC GAGCGCATCT TCGATGCGCC CGCGGAAGAC
TATACACGGG CGCTGATGGC CGCCGCCTTC AATCTCGAAG CGGTCAATCT CGCCGCCGTT
CATCAGTAG
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| Protein sequence | MTDTILSVRD LSVAFHQGGE TSLAVDRISF DIKRGETVAL VGESGSGKSV SANSILRLLP
YPAASHPSGE IVFNGKDLLK VGEDELRHVR GNDVTMIFQE PMTSLNPLHT IEQQIGEILE
IHQNLKGAAA RARTLELLDQ VGIREAEKRL GAYPHQLSGG QRQRVMIAMA LANRPELLIA
DEPTTALDVT VQAQILELLK SLKDEHGMSM LFITHDLGIV RKIADRVCVM TKGKIVETGP
TAEIFANPQH DYTRHLLASE PRGEPPPSDT SSPIVVEASG MKVWFPIKAG FLRRVVDHVK
AVDGIDLTLR AGQTLGVVGE SGSGKTTLGL ALTRLISSKG RIAFVGENID AHSFREMRPL
RNRMQVVFQD PYGSLSPRMS IADIIGEGLK IHEKALTDNE RDGRVAAALE EVGLDPATRW
RYPHEFSGGQ RQRIAIARAM VLKPQFVMLD EPTSALDMSV QAQVVDLLRD LQRKHNLAYL
FISHDLRVVR ALANEVIVMR LGKVVEQGPA ERIFDAPAED YTRALMAAAF NLEAVNLAAV
HQ
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