Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3362 |
Symbol | |
ID | 5324246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3561585 |
End bp | 3562544 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640792313 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001329018 |
Protein GI | 150398551 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.83049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCA AAAGCCCGGT GATCGTCGAC CTGAAATTCA TCCCCGAAGA GGTGGAGGCG GCCCTTGCAG GGGCCTTTCC CGACCGAGAG GTCATCGATC TCGCTGACCC GGTGCATCGG GGGCGTGACC TGTCCGGCAT CGATTATGCC GTGGTCTGGA AATCCGCCCC CGACCTCTTT TCGCGGGCAC CGGACCTCAA AGTGGTCTTT TCCGGCGGCG CCGGCGTCGA CCACGTGCTG ACGCTTCCCG GCCTGCCCGA CGTGCCGCTG GTGCGCTTCG TCGATCGGAC GTTGACGACG CGGATGAGCG AGTGGGTCGT AATGCAGTGC CTCCTGCATC TTCGCCAGCA CCACGCCTAC GAGGCGCTTG CGAACAGGCA CGAATGGCGC GACCTCAGTC AGCCAGAGGC AGCCGACGTG ACCGTCGGCA TCATGGGAAT GGGCGTGCTC GGCCAGGACG CCGCCCGCAA GCTCGCCGTC ATGGGCTTCA AGGTGATCGG CTGGTCGCGA AGCAAGCGGG TGATCGAGGG TGTAGAGACC TACGACGCTG CCGGACTGGA CGCATTTCTC GGCCAAACGG ATTTCCTCGT CGGCCTGCTG CCGCTGACGC CGGAGACCAG AGGCATATTC AACGGCGCCC TTTTTGCCAA GCTCAGCCGC CGAGGACCTT TCGGCGCGCC TGTTTTCATC AATGCAGGCC GGGGCGGCAG CCAGGTCGAG GCCGATATCC TGGAATGCAT CGATTCCAGT ATGCTCGCAG GCGCCTCGCT CGACGTCTTC GAACGGGAGC CGCTCCCGCA GGAAAGCCGC TTCTGGGACC TGCCGAACGT CTACGTGACC CCGCATGTCG CAGCCTCGTC CGACGTCAGG GCCCTCTTCG TCCATGTAGA ACATCAGATC GCGCGCTTCG AGAGCGGGCT TCCCCTGGAA CATGTGGTGG ATAAGGTAGC CGGCTACTGA
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Protein sequence | MSAKSPVIVD LKFIPEEVEA ALAGAFPDRE VIDLADPVHR GRDLSGIDYA VVWKSAPDLF SRAPDLKVVF SGGAGVDHVL TLPGLPDVPL VRFVDRTLTT RMSEWVVMQC LLHLRQHHAY EALANRHEWR DLSQPEAADV TVGIMGMGVL GQDAARKLAV MGFKVIGWSR SKRVIEGVET YDAAGLDAFL GQTDFLVGLL PLTPETRGIF NGALFAKLSR RGPFGAPVFI NAGRGGSQVE ADILECIDSS MLAGASLDVF EREPLPQESR FWDLPNVYVT PHVAASSDVR ALFVHVEHQI ARFESGLPLE HVVDKVAGY
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