Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3346 |
Symbol | |
ID | 5324230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3546580 |
End bp | 3547164 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792297 |
Product | hypothetical protein |
Protein accession | YP_001329002 |
Protein GI | 150398535 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGTGCA TGCATGCGCG TAGACAGTCG CCGTTCCGTA CCCTTCGCCG TCTGCTGCGG GATCGGCGCG GCGCCGGTGC CGTGGAATTC GCCATTGTCG CGCCGCTTCT GATTGCCGCC TATATCGGCG CCTTCGAGCT TTCGCTCGGC TTCACCGTCG CGAGAAAGGT GTCGCGCGCC TCGAGTGCGG TGAGCGATAT CGTCACCACC GGGCAGCAGG TGAACAAGGC CTTTCTGGAC GATATGCGGA ACGTCGCTAA AAACATGTTG GTGCCCTATG ACAGCTCCGA CTACGAGCTC AAAATCACCG GCATACAGGT GGACGGTACG ACGGAAGGCA GGGTCGCCTG GTCCCGGGCC TGGTCGGATG CGAGCAATAG CGCCACGGTT CCCTACGCAC TCAATTCGGT CGTCAGCGTT CCGGCCGATC TCGACGCGGT GAATGCCTTC GTCGTGCGAA CGGAACTCGT CGTGAACCAT CAGCTTTCCC TGTTCGGCTC GGACGCCGGC GCCATGATCC CCCTTTCCCG GACCTCCTAC TATCGTCAGC GCTTCGGCAC GACCATCAAA TGCACGGACT GCTGA
|
Protein sequence | MGCMHARRQS PFRTLRRLLR DRRGAGAVEF AIVAPLLIAA YIGAFELSLG FTVARKVSRA SSAVSDIVTT GQQVNKAFLD DMRNVAKNML VPYDSSDYEL KITGIQVDGT TEGRVAWSRA WSDASNSATV PYALNSVVSV PADLDAVNAF VVRTELVVNH QLSLFGSDAG AMIPLSRTSY YRQRFGTTIK CTDC
|
| |