| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3343 |
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| Symbol | upp |
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| ID | 5324227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3543425 |
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| End bp | 3544054 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640792294 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_001328999 |
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| Protein GI | 150398532 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.840691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGGCG TAACGGTGAT CGGTCATCCG CTGGTGCAGC ACAAGCTGAC CATCATGCGC
AAGAAGGAAA CGTCGACTGC GGGCTTCCGC CGGCTGCTCA AGGAAATATC GACGCTGCTC
TGTTACGAGG TCACACGCGA TCTGGAATTG ACGACGGAGC GGATCGAGAC GCCTCTGGAG
GAAACGGACG CGCCGGTGCT CGAGGGCAAG AAGCTTGTCT TCGCTTCGAT CCTGCGCGCC
GGCAACGGCC TGCTCGAGGG CATGCTCGAA CTGGTCCCCT CGGCACGCGT TGCGCATATC
GGCGTCTACA GGGACCACGA GACGCTGCAG GCGGTCGAAT ATTTTTTCAA GGCGCCGGAC
AACATCAACG AACGCCTCGT CATCGTCGTC GACCCGATGC TCGCCACCGG CAACTCTTCG
ATCGCAGCGG TCGAGAAACT CAAAGAGCGT GGTGCGCGGA ACATCCGTTT CCTCTGCCTC
CTTGCGGCTC CCGAGGGCAT CCGCAACTTC CAGGGCGTAC ATCCGGACGT GCCGATCTTC
ACGGCCTCGA TCGACAGCCA CCTCAACGAG TTGGGCTATA TCGTTCCAGG TCTTGGGGAT
GCCGGCGACC GCATGTACGG AACGAAGTAG
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| Protein sequence | MDGVTVIGHP LVQHKLTIMR KKETSTAGFR RLLKEISTLL CYEVTRDLEL TTERIETPLE
ETDAPVLEGK KLVFASILRA GNGLLEGMLE LVPSARVAHI GVYRDHETLQ AVEYFFKAPD
NINERLVIVV DPMLATGNSS IAAVEKLKER GARNIRFLCL LAAPEGIRNF QGVHPDVPIF
TASIDSHLNE LGYIVPGLGD AGDRMYGTK
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