Gene Smed_3335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3335 
Symbol 
ID5324219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3533307 
End bp3534596 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content61% 
IMG OID640792286 
Productoxidoreductase domain-containing protein 
Protein accessionYP_001328991 
Protein GI150398524 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACA AGCGTCGCTT TGCGCTGGTC GGCACCGGCA ATCGCGGAAC CACCATGTGG 
GGCAAGGATC TTCTCGCCGG ATGGCGCGGA CTTGTCGACC TCGTCGCCAT TGCGGACACC
AACTCGCTCA GGGCCGAGCG CGCCCGGACG ATGATCGCAA CCAATGCGCC GATCTATGAC
AGTGTCGATT CGATGCTTGC CGAAACGCGC CCCGATCTCG TCATAGTCTG TACGCCTGAC
GATACGCATG ACGACATCGT CGTGCGTGCG CTCGAATCGG GTGCCGACGT CATCACCGAA
AAACCGATGT CGACCACGGT TGAGAAGATC CGGCGGATTC TCGAAGCCGA GAAGCGCACC
GGCCGACGGG TGGATGTGTC CTTCAACTAC CGTTTTGCGC CGACGGCGGC ACGCATAAAG
GAACTCCTGA ACGCCGGTGA GATCGGCCGC ATCACCTCCG TAGACTTCCA TTGGTATCTG
GATACAAGGC ACGGCGCCGA TTATTTCCGC CGCTGGCATG CCTATGCGGA ACGCTCGGGA
AGCCTTTTCG TGCACAAGGC GACCCACCAT TTCGACCTCC TGAACTGGTA TCTGGACAGC
GATCCGGACT CCGTCGGTGC CTTTGCCGAC CTGCAGATGT ACGGCCGCAA GGGACCGTTT
CGCGGGCCGC GCTGCAAGCT CTGTCCCCAC AAGAGCGAGT GCGACTTCTA TCTCGACCTC
GAAGCCGATC CGTTTCTCGA CGCGCTCTAC GAGGAACCCT CCGAAATCGA CGGCTATTTC
CGCGACGGTT GCGTCTTTCG AGAGGACATC GACATACCGG ACACGATGGT TGCGAATATC
CGGTATCGCA ACGACGTCCA CGTTTCCTAT TCGCTCAACA CCTTCCAGCC GATCGAGGGC
CACCACATCG CCTTCAACGG AACGAAGGGC AGGATAGAGC TTCGCCAGTA CGAAGATCAG
CCGTGGGAGG CGCCGCCGGA AGACGTAATC CTGCTCGTCC GCAATTTCCC CAAGGGCAAG
GCTGCGGTGG AGCGCATCAC GGTTCCGCAT TCCGCCGGCG GCCACTACGG CGGCGACGAT
AGACTTCGAA ATACGCTCTT CAAGCCGGGC GCGACCGATC CTTTGGGGCA GCGCGCAGGG
GCCCGGGCGG GTGCCATGTC CGTGCTTTGC GGCATTGCCG CTCTGGAGAG CGCCCGCAAG
GGCAAGGTTG TGCGGCTTGC CGATTTAATG CCGGAATTGT TCGTGGAGGA GACGCAGGCG
GTAAGCAGGC TTGCGGCGAA TGGCGCATAG
 
Protein sequence
MDNKRRFALV GTGNRGTTMW GKDLLAGWRG LVDLVAIADT NSLRAERART MIATNAPIYD 
SVDSMLAETR PDLVIVCTPD DTHDDIVVRA LESGADVITE KPMSTTVEKI RRILEAEKRT
GRRVDVSFNY RFAPTAARIK ELLNAGEIGR ITSVDFHWYL DTRHGADYFR RWHAYAERSG
SLFVHKATHH FDLLNWYLDS DPDSVGAFAD LQMYGRKGPF RGPRCKLCPH KSECDFYLDL
EADPFLDALY EEPSEIDGYF RDGCVFREDI DIPDTMVANI RYRNDVHVSY SLNTFQPIEG
HHIAFNGTKG RIELRQYEDQ PWEAPPEDVI LLVRNFPKGK AAVERITVPH SAGGHYGGDD
RLRNTLFKPG ATDPLGQRAG ARAGAMSVLC GIAALESARK GKVVRLADLM PELFVEETQA
VSRLAANGA