Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3335 |
Symbol | |
ID | 5324219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3533307 |
End bp | 3534596 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640792286 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001328991 |
Protein GI | 150398524 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAACA AGCGTCGCTT TGCGCTGGTC GGCACCGGCA ATCGCGGAAC CACCATGTGG GGCAAGGATC TTCTCGCCGG ATGGCGCGGA CTTGTCGACC TCGTCGCCAT TGCGGACACC AACTCGCTCA GGGCCGAGCG CGCCCGGACG ATGATCGCAA CCAATGCGCC GATCTATGAC AGTGTCGATT CGATGCTTGC CGAAACGCGC CCCGATCTCG TCATAGTCTG TACGCCTGAC GATACGCATG ACGACATCGT CGTGCGTGCG CTCGAATCGG GTGCCGACGT CATCACCGAA AAACCGATGT CGACCACGGT TGAGAAGATC CGGCGGATTC TCGAAGCCGA GAAGCGCACC GGCCGACGGG TGGATGTGTC CTTCAACTAC CGTTTTGCGC CGACGGCGGC ACGCATAAAG GAACTCCTGA ACGCCGGTGA GATCGGCCGC ATCACCTCCG TAGACTTCCA TTGGTATCTG GATACAAGGC ACGGCGCCGA TTATTTCCGC CGCTGGCATG CCTATGCGGA ACGCTCGGGA AGCCTTTTCG TGCACAAGGC GACCCACCAT TTCGACCTCC TGAACTGGTA TCTGGACAGC GATCCGGACT CCGTCGGTGC CTTTGCCGAC CTGCAGATGT ACGGCCGCAA GGGACCGTTT CGCGGGCCGC GCTGCAAGCT CTGTCCCCAC AAGAGCGAGT GCGACTTCTA TCTCGACCTC GAAGCCGATC CGTTTCTCGA CGCGCTCTAC GAGGAACCCT CCGAAATCGA CGGCTATTTC CGCGACGGTT GCGTCTTTCG AGAGGACATC GACATACCGG ACACGATGGT TGCGAATATC CGGTATCGCA ACGACGTCCA CGTTTCCTAT TCGCTCAACA CCTTCCAGCC GATCGAGGGC CACCACATCG CCTTCAACGG AACGAAGGGC AGGATAGAGC TTCGCCAGTA CGAAGATCAG CCGTGGGAGG CGCCGCCGGA AGACGTAATC CTGCTCGTCC GCAATTTCCC CAAGGGCAAG GCTGCGGTGG AGCGCATCAC GGTTCCGCAT TCCGCCGGCG GCCACTACGG CGGCGACGAT AGACTTCGAA ATACGCTCTT CAAGCCGGGC GCGACCGATC CTTTGGGGCA GCGCGCAGGG GCCCGGGCGG GTGCCATGTC CGTGCTTTGC GGCATTGCCG CTCTGGAGAG CGCCCGCAAG GGCAAGGTTG TGCGGCTTGC CGATTTAATG CCGGAATTGT TCGTGGAGGA GACGCAGGCG GTAAGCAGGC TTGCGGCGAA TGGCGCATAG
|
Protein sequence | MDNKRRFALV GTGNRGTTMW GKDLLAGWRG LVDLVAIADT NSLRAERART MIATNAPIYD SVDSMLAETR PDLVIVCTPD DTHDDIVVRA LESGADVITE KPMSTTVEKI RRILEAEKRT GRRVDVSFNY RFAPTAARIK ELLNAGEIGR ITSVDFHWYL DTRHGADYFR RWHAYAERSG SLFVHKATHH FDLLNWYLDS DPDSVGAFAD LQMYGRKGPF RGPRCKLCPH KSECDFYLDL EADPFLDALY EEPSEIDGYF RDGCVFREDI DIPDTMVANI RYRNDVHVSY SLNTFQPIEG HHIAFNGTKG RIELRQYEDQ PWEAPPEDVI LLVRNFPKGK AAVERITVPH SAGGHYGGDD RLRNTLFKPG ATDPLGQRAG ARAGAMSVLC GIAALESARK GKVVRLADLM PELFVEETQA VSRLAANGA
|
| |