Gene Smed_3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3332 
Symbol 
ID5324216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3529704 
End bp3530867 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content65% 
IMG OID640792283 
Producthypothetical protein 
Protein accessionYP_001328988 
Protein GI150398521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.581336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA TCAGTCTTCC CGTCGGCGGT CGGCTCCTTC CCTACGAACT CACCGGCCGG 
CCGGTGCCGT TGAAGGGGCG CGATGCGGCT GCCTTTCCGA GGGTCGCTTT CGCCGCCGCC
CATGTCGTCG CCGACCCGCT TGCCGACAAT GATCCCTGGG TGACGCCGGC AATCGACTGG
GAGCGTACGC TTGCCTTTCG CCATCGCCTC TGGGATCTCG GGCTCGGTGT CGCCGAATCG
ATGGACACGG CCCAGCGCGG CATGGGTCTC GGCTGGCCTG AGGCACGCGA ACTCATCGGC
CGCTCGCTCA GCGAGGCGCG CGGCCGTTCC GGCGCGCTGA TAGCCTGCGG CGCGGGAACC
GATCATCTGG TCCCGGGGCC CAACGTCACG ATCGACGAAA TCCTCAGGGC TTATGAGAGT
CAGATCGAGA CGATCGAGGC CGAAGGCGGC CGCATCATCC TGATGGCGAG CCGGGCGCTT
GCTGCCGCGG CAAAGGGGCC GGAGGACTAT TTCCGGGTCT ACGACCGCAT TCTCTCGCAG
GTGAAGGAGC CGGTGATCAT CCACTGGCTC GGTGAGATGT TCGATCCGGC GCTCGAAGGC
TATTGGGGCA ATGCCGACCA TATGGCGGCG ATGAAGACCT GCCTCGACGT CATCGAGGCG
CATGCCGCCA AGGTCGACGG CATCAAGATT TCACTCCTTT CCAAGAAGAA GGAGATCGTG
ATGCGACGGC AATTGCCGAA GGGCGTGCGC ATGTACACCG GGGACGATTT CAACTATGCC
GAGCTGATTT CCGGCGACGA GGAAGGGTAT TCGGACGCAC TGCTCGGCAT CTTCGATGCG
ATCGCGCCGG TTGCTTCGGC TGCGCTGGAA GCGCTGGGCG GCGGGCGAAA TGGGGAATTC
TTCGAATTGC TGGATCCGAC GGTGCCGCTC TCGCGCCACA TCTTCAAGGC ACCGACGCGC
TTCTACAAGA CCGGTGTCGT GTTTCTGGCC TATCTCAACG GCCTTCAGGA CCATTTCGCC
ATGATCGGCG GACAGCAGAG CGCCCGGTCG CTCGTCCATC TCGCCGAGCT TTTCCGTCTG
GCGGACAGAG CCGGCGTTCT CCAGGATCCG GAGCTGGCCG CCGGGCGCAT GCGGCGCGTC
CTCGCCGTCA ACGGCGTCGC GTGA
 
Protein sequence
MASISLPVGG RLLPYELTGR PVPLKGRDAA AFPRVAFAAA HVVADPLADN DPWVTPAIDW 
ERTLAFRHRL WDLGLGVAES MDTAQRGMGL GWPEARELIG RSLSEARGRS GALIACGAGT
DHLVPGPNVT IDEILRAYES QIETIEAEGG RIILMASRAL AAAAKGPEDY FRVYDRILSQ
VKEPVIIHWL GEMFDPALEG YWGNADHMAA MKTCLDVIEA HAAKVDGIKI SLLSKKKEIV
MRRQLPKGVR MYTGDDFNYA ELISGDEEGY SDALLGIFDA IAPVASAALE ALGGGRNGEF
FELLDPTVPL SRHIFKAPTR FYKTGVVFLA YLNGLQDHFA MIGGQQSARS LVHLAELFRL
ADRAGVLQDP ELAAGRMRRV LAVNGVA