Gene Smed_3326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3326 
Symbol 
ID5324210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3523399 
End bp3524415 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content65% 
IMG OID640792277 
Productoxidoreductase domain-containing protein 
Protein accessionYP_001328982 
Protein GI150398515 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.928742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAC TGCGCTTCGC CGCCGTTGGG CTCAATCACA ACCATATCTA CGGCCAGGTC 
AATTGCCTGC TGCGAGCGGG CGCCCGCCTC GCCGGCTACC ACGAAGAGGA CAATGCGCTC
GCCGCGGAAT TCTCCGGCGC CTACGGGGAT GCGCCGCGCA TCGCGACGCT GGAGGAAATC
CTTGAAGACG AGAGCATCGG CCTCATCGTC ACCGCCGCCG TTTCGAGCCA GCGCGCAGAA
CTGGCGATCC GCGCCATGCA AAACGGCAAG GATGTGCTCA CCGACAAGCC GGGCATGACA
AGCTTCGACC AGCTCGCGAA ACTGCGCCGG GTCCAGGCCG ATACGGGCCG CATCTTCTCC
ATTCTTTATT CGGAGCATTT CGAAAGCCCG GCAACGGTCA AGGCCGGCGA GCTCATCGCT
GAAGGCGCGA TCGGCGATGT GGTGCACGTC GTCGGTCTCG GGCCGCACCG GCTGCGGCGC
GAGTCGCGGC CCGGCTGGTT TTTCCGGCGC GCCGATTACG GCGGCATCCT GACCGATATC
GCCTCGCACC AGTGCGAGCA GTTTCTGTTC TTCACCGGCG CGAGCGACGC CACGGTTCTT
TCGGCAAGTG TCGGCAATCG GAGCGTTCCC GACGCTCCGG AACTGCAGGA TACGGGGAGC
ATCCATCTTA CGACCGGGCA GGCGACCGGC ATGATCCATG TAAACTGGCT GACCCCGGAT
GGAATGCCGA CCTGGGGCGA CGGCCGCCTC TTCATCGTCG GCACGTCAGG TACGATCGAG
GTGCGCAAGA CGGTCGATCT CGCCGGACGC CAGGGCGGCA ACCACCTGCT TATCGCCGAC
CGCAAGGGCG TCGAACATAT CGATTGCTCC GGCGTCGACC TGCCGTTCGG CCGCCTCTTC
CTGGCCGACC TCAGGGACCG TACCGAAACC GCGATGCAGC AGGAGCGCTG CTTCAAAGCC
ATGGAACTCG CGCTTCAAGC GCAGGCGATC GCCGAGCTGA ACGGAGGCAG GAACTGA
 
Protein sequence
MDELRFAAVG LNHNHIYGQV NCLLRAGARL AGYHEEDNAL AAEFSGAYGD APRIATLEEI 
LEDESIGLIV TAAVSSQRAE LAIRAMQNGK DVLTDKPGMT SFDQLAKLRR VQADTGRIFS
ILYSEHFESP ATVKAGELIA EGAIGDVVHV VGLGPHRLRR ESRPGWFFRR ADYGGILTDI
ASHQCEQFLF FTGASDATVL SASVGNRSVP DAPELQDTGS IHLTTGQATG MIHVNWLTPD
GMPTWGDGRL FIVGTSGTIE VRKTVDLAGR QGGNHLLIAD RKGVEHIDCS GVDLPFGRLF
LADLRDRTET AMQQERCFKA MELALQAQAI AELNGGRN