| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3321 |
|---|
| Symbol | |
|---|
| ID | 5324205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3518696 |
|---|
| End bp | 3519418 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640792272 |
|---|
| Product | GntR domain-containing protein |
|---|
| Protein accession | YP_001328977 |
|---|
| Protein GI | 150398510 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.580884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACGACG TAACATTGAA ACTGAAACCG GCGCGGCGGG AGAGGCTCGC AGACGTTCTC
TACGGACAGA TCCTCGAACA GATCGTAAGC GGCCAGATGG CCGAAGGCGC GAAACTGCCG
TCGGAAGCGC ATATCTGCCG CGACTTTCAA GTTTCCCGTC CGGTCGTGCG AGAGGCGCTG
ATGCGGTTGC AGGCCGACGG GCTGGTCGTG TCGCGCCAGG GGATCGGCAC CTTCGTCAAA
TCGCGTCCGT CCGACAAGCT CACCAGTCTC GCCGCCTCGG CCGAGATCGC GAGCTATCTC
AGGGCTTTCG AGCCCCGGCT CGCGCTCGAG ACGGAGTGTG CGGGACTTGC CGCGATGCGC
CGTACAAAGG CCCAGCTCAA CCAGATAGGC GAGGCGCTGT CGGCCTTGGA AGGCGCTTTT
GCGCGCGGCG AAACCGGATG GGAAGAGGAC TTCGCCTTTC ACCACGCCGT GGCTGAGGCT
GCGGGAAACG AACTTTTTCC GCGACTTCTG GAGGATTTGC GTGAAATTCT TAGCGGCTCG
ATGCGCATGG CGCTCGGTCT GACGCGGCAG GGCTCCGATG ACCGCCGCCG CCGTGTCCGG
GAAGAGCACC GCAAGATCTA CTCTGCCATT TCCGGCCAGA ACCGGGATCT CGCCCGCCTT
TACATGCGCT ACCATCTGAC GGAATCGCGC GCCCGTATCA CCGGGTCCCA TGGCGATCTC
TGA
|
|---|
| Protein sequence | MNDVTLKLKP ARRERLADVL YGQILEQIVS GQMAEGAKLP SEAHICRDFQ VSRPVVREAL
MRLQADGLVV SRQGIGTFVK SRPSDKLTSL AASAEIASYL RAFEPRLALE TECAGLAAMR
RTKAQLNQIG EALSALEGAF ARGETGWEED FAFHHAVAEA AGNELFPRLL EDLREILSGS
MRMALGLTRQ GSDDRRRRVR EEHRKIYSAI SGQNRDLARL YMRYHLTESR ARITGSHGDL
|
|---|
| |