Gene Smed_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3313 
Symbol 
ID5324197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3506466 
End bp3507431 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content62% 
IMG OID640792265 
Productferredoxin 
Protein accessionYP_001328970 
Protein GI150398503 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGTG GTACCGAAAT TCCCGTCCGC GTGACCAAGG TGACGCCCGT TGCGCATCGC 
ATCAAGCGCT TCCGCTTCGA GCGCCTGGAT GGCCGGCCGA TGCCGTACTT CTCCGGTGGC
GCTCACGTCA TCGTTTCGAT GAACGACAAT GGCCACCTCC GGCGCAACGC CTACTCGCTG
ATGTCGCCGC CATATGATTG CTCGGCCTAC GAGATCAGCG TTCTGCATGT CGATGATTCG
CGTGGCGGCT CGTCCTTCAT GCACGAGAAG GTGCGCGAAG GCGACGAGAT GAGGGTCTCC
CATCCGGTCA ATCTGTTCCA GCCGGATTGG CGCGGCCGCA AACATCTGCT GATTGCCGGC
GGCATCGGGA TCACGCCCTT CATCGCCATG ATGGAGCAGT TTTCCCGCGA GGGTGCCCAG
TTCGAATTGC ATTATGCCAT TCGGTCGCGC GACCGCGGCG CATATTGCGA GGACCTCGTC
GCCCACTACG GACGGCATCG GGTGAAGATC TATTGCGATG CCGAAGACAA TCGCATTCCG
GTCGCCCGCT TGCTCGACAG CCAACCGCTC GGCACGCATC TCTATGTCTG CGGTCCCGCG
GGCCTGATCG ACGGCGTACT CAAGTCCGGG CTGGAGTCTG GCTGGCCGGA GCAGAACCTG
CATTCCGAGC GCTTTCTGTC CTCCCAGCCC GGCAAGCCCT TTTCGATCGA GCTGACGCGC
TCCGGCAAGA CCGTCCATGT CGGTCATCAT GAGAGCATGC TGGAGGCGAT TGAGTCGGCC
GGCGTCGATG CGCCCTTTCT CTGTCGCGGC GGTGCCTGCG GGCAATGCGA AACAAGGGTC
GCACTCTGCG ACGGCAAGCT GCTGCACAAC GACGTCTATC TGACCGACGA AGAAAAGGCT
TCCGGCCGAA AGGTGATGCT CTGCGTCTCT CGATTCGAGG GAAAGGCCTT GCATCTCGAC
CTCTAG
 
Protein sequence
MSGGTEIPVR VTKVTPVAHR IKRFRFERLD GRPMPYFSGG AHVIVSMNDN GHLRRNAYSL 
MSPPYDCSAY EISVLHVDDS RGGSSFMHEK VREGDEMRVS HPVNLFQPDW RGRKHLLIAG
GIGITPFIAM MEQFSREGAQ FELHYAIRSR DRGAYCEDLV AHYGRHRVKI YCDAEDNRIP
VARLLDSQPL GTHLYVCGPA GLIDGVLKSG LESGWPEQNL HSERFLSSQP GKPFSIELTR
SGKTVHVGHH ESMLEAIESA GVDAPFLCRG GACGQCETRV ALCDGKLLHN DVYLTDEEKA
SGRKVMLCVS RFEGKALHLD L