Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3310 |
Symbol | purU |
ID | 5324194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3503641 |
End bp | 3504525 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640792262 |
Product | formyltetrahydrofolate deformylase |
Protein accession | YP_001328967 |
Protein GI | 150398500 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAATT TCGTTCTGAC TGTCACCTGC AAATCGACGC GCGGCATCGT CGCCGCCATC TCCGGATACC TGGCCGGGCA GGGCTGCAAC ATCGTCGATT CGTCGCAATT CGATGACCTC GAAACGGGTC TGTTCTTCAT GCGTATTAGC TTCATCTCCG AGGAAAGGCT GGGCCTTGCG GCTCTTGAGG AGGGGCTGAA GCCGATTGCC TCGAAGTTCG AAATGGTGAC GGCTCTTCAC GAACAGTCGG AGCGGATGAA GGTTCTTCTG ATGGTGTCGC GTTTCGGCCA TTGCCTGAAC GACCTGCTCT ACCGCTGGAA GATCGGGGCG CTGCCGATCG ACATCGTCGG CGTCGTTTCC AACCATTTCG AGTACCAGAA GGTGGTCGTC AACCACGACA TCCCCTTCCA TTGCATCAAG GTGACCAAGG AGAACAAGCC CAGGGCCGAA GCCCAGCTGA TGGAAGTGGT CGAGCAGACC GGCGCCGAGC TGATCGTGCT TGCCCGCTAC ATGCAGGTGC TTTCGGATGC GCTGTGCAAG AAGATGTCGG GGAAGATCAT CAACATCCAC CACTCCTTCC TGCCGTCGTT CAAGGGGGCG AACCCCTACA AGCAGGCCTA TGAGCGCGGC GTAAAGCTGA TCGGCGCGAC GGCGCATTAC GTCACCGCCG ATCTCGACGA GGGTCCGATC ATCGAGCAGG ACATCGCCCG CATCACCCAT GCGCAGTCGG CCGAGGATTA CGTCTCGATC GGCCGGGATG TCGAAAGCCA GGTGCTGGCG CGGGCCGTGC ACGCCCATAT CCACCACCGC TGCTTCATCA ACGGCAACCG CGTCGTCGTC TTCCCGCCGA GCCCGGGAAG CTACGCCTCC GAACGGATGG GCTGA
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Protein sequence | MQNFVLTVTC KSTRGIVAAI SGYLAGQGCN IVDSSQFDDL ETGLFFMRIS FISEERLGLA ALEEGLKPIA SKFEMVTALH EQSERMKVLL MVSRFGHCLN DLLYRWKIGA LPIDIVGVVS NHFEYQKVVV NHDIPFHCIK VTKENKPRAE AQLMEVVEQT GAELIVLARY MQVLSDALCK KMSGKIINIH HSFLPSFKGA NPYKQAYERG VKLIGATAHY VTADLDEGPI IEQDIARITH AQSAEDYVSI GRDVESQVLA RAVHAHIHHR CFINGNRVVV FPPSPGSYAS ERMG
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