Gene Smed_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3310 
SymbolpurU 
ID5324194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3503641 
End bp3504525 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content60% 
IMG OID640792262 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_001328967 
Protein GI150398500 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATT TCGTTCTGAC TGTCACCTGC AAATCGACGC GCGGCATCGT CGCCGCCATC 
TCCGGATACC TGGCCGGGCA GGGCTGCAAC ATCGTCGATT CGTCGCAATT CGATGACCTC
GAAACGGGTC TGTTCTTCAT GCGTATTAGC TTCATCTCCG AGGAAAGGCT GGGCCTTGCG
GCTCTTGAGG AGGGGCTGAA GCCGATTGCC TCGAAGTTCG AAATGGTGAC GGCTCTTCAC
GAACAGTCGG AGCGGATGAA GGTTCTTCTG ATGGTGTCGC GTTTCGGCCA TTGCCTGAAC
GACCTGCTCT ACCGCTGGAA GATCGGGGCG CTGCCGATCG ACATCGTCGG CGTCGTTTCC
AACCATTTCG AGTACCAGAA GGTGGTCGTC AACCACGACA TCCCCTTCCA TTGCATCAAG
GTGACCAAGG AGAACAAGCC CAGGGCCGAA GCCCAGCTGA TGGAAGTGGT CGAGCAGACC
GGCGCCGAGC TGATCGTGCT TGCCCGCTAC ATGCAGGTGC TTTCGGATGC GCTGTGCAAG
AAGATGTCGG GGAAGATCAT CAACATCCAC CACTCCTTCC TGCCGTCGTT CAAGGGGGCG
AACCCCTACA AGCAGGCCTA TGAGCGCGGC GTAAAGCTGA TCGGCGCGAC GGCGCATTAC
GTCACCGCCG ATCTCGACGA GGGTCCGATC ATCGAGCAGG ACATCGCCCG CATCACCCAT
GCGCAGTCGG CCGAGGATTA CGTCTCGATC GGCCGGGATG TCGAAAGCCA GGTGCTGGCG
CGGGCCGTGC ACGCCCATAT CCACCACCGC TGCTTCATCA ACGGCAACCG CGTCGTCGTC
TTCCCGCCGA GCCCGGGAAG CTACGCCTCC GAACGGATGG GCTGA
 
Protein sequence
MQNFVLTVTC KSTRGIVAAI SGYLAGQGCN IVDSSQFDDL ETGLFFMRIS FISEERLGLA 
ALEEGLKPIA SKFEMVTALH EQSERMKVLL MVSRFGHCLN DLLYRWKIGA LPIDIVGVVS
NHFEYQKVVV NHDIPFHCIK VTKENKPRAE AQLMEVVEQT GAELIVLARY MQVLSDALCK
KMSGKIINIH HSFLPSFKGA NPYKQAYERG VKLIGATAHY VTADLDEGPI IEQDIARITH
AQSAEDYVSI GRDVESQVLA RAVHAHIHHR CFINGNRVVV FPPSPGSYAS ERMG