| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3297 |
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| Symbol | |
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| ID | 5324181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3489413 |
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| End bp | 3490810 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792249 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001328954 |
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| Protein GI | 150398487 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATA TTACATCCGC CGCGGCTGAG CCGGACCGGT TGCGGCTGTT GAGGGTTCTC
GGACCCTCGC ATGTCTGGGC ACTCGGCGTC GGCATCGTGC TCGTCGGCGA ATATATGGGC
TGGAATTTCT CCGTGGGCAA AGGCGGCATG ATCGCCGGCC TGATGGCCTG CTGGGTGGCA
GGCCTGCTCT ACACCTGCGT CGCCATGATC GACTCCGAGG TTACCTCGAC GGTCGCCGCA
GCGGGTGGTC AGTACGCTCA GGCAAAACAC ATCGTCGGCC CGCTGATGGC GTTCAATGTC
GGTCTTTTCC TCGTCATGGC CTATACCATG CTCGAGGCCG CCAACGCCAT CACCGTCGGC
TTCCTGCTCG ACACTGTGGC GGGCATGCAG GGCCAGGCAG GCCTCAACCA GCAGCCCTTC
ATCGTTCTCG CCGTCATGTT CCTGGCATGG CTCAACTATC GCGGCGTGCT CGCGACCCTG
ACCTTCAACC TGGTCATCAC CGCCGTCGCC TTCCTTGCGA TCGTGGCGCT GTTCGTGTCG
GTGCAGTTCG GCGCCTCTGC AGTGCCGCTC GATTTTTCGG CGATCACCAC GGATCCGCTC
CCCTATGGCT GGGTCGGGAT CGTTGCATCG CTGCACTTCG GCCTCTGGTA CTATCTCGGC
ATCGAGGGTA CCTGCCAGGC AGCCGAGGAG GTGCGCTCAC CTGCCCGTTC GCTTCCCTAT
GGCACGATGG CCGGCATCAT GACACTGCTG GTTGCGGCCA CAATGACCTG GTATATCTGC
TCCGGCCTGA TGCCGTGGGA ATATCTTGGT CAGGCCGGAA CGCCCTTGTT CGACGCCGCC
CGCGTCACCG GCAGCACCGG GTTGATGATC CTGCTGTTCG TCGGCACGGC CTTCGCCACG
CTCGCCTCGG CAAACGGCTG CATCAACGAC GCTTCACGGG CCTGGTTCTC GATGAGCCGC
GACCGCTATC TGCCGAGCTG GTTCGGTGCC GTCCATCCGG TCTACCGCAC GCCCTATCGC
GCAATCGTCT TCCTGGTCCC CATCGCGCTC ATTTTCGCGC TCGGAGCCCC GCTCGATCAG
GTCGTGACCT TCTCCATTCT TTCGGGCCTG CTCGGCTACA CCTTCATGAC CTTCAACATG
GTGATGTTCC GAAACAAGTG GCCGCTCGGC AAGATCAAAC GCGGCTACGT GCACCCGTTT
CACCCTTTGC CGACGATCGT GCTGCTCATT CTGTGCTCGA CCGCCTATTT CGCCGTGTTC
CTCGGCTACG GCACGCAGCT CAGCGCGATG ATGTGCTTCT ATATCATAGC GTCGCTGTGG
TTCCACTTCC GGCGCTACAA GTTCGTACGC CGCGGCGACC AGTTCACGAT GCCCTGGCCG
AAGCCGCAAG GCTATTGA
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| Protein sequence | MDDITSAAAE PDRLRLLRVL GPSHVWALGV GIVLVGEYMG WNFSVGKGGM IAGLMACWVA
GLLYTCVAMI DSEVTSTVAA AGGQYAQAKH IVGPLMAFNV GLFLVMAYTM LEAANAITVG
FLLDTVAGMQ GQAGLNQQPF IVLAVMFLAW LNYRGVLATL TFNLVITAVA FLAIVALFVS
VQFGASAVPL DFSAITTDPL PYGWVGIVAS LHFGLWYYLG IEGTCQAAEE VRSPARSLPY
GTMAGIMTLL VAATMTWYIC SGLMPWEYLG QAGTPLFDAA RVTGSTGLMI LLFVGTAFAT
LASANGCIND ASRAWFSMSR DRYLPSWFGA VHPVYRTPYR AIVFLVPIAL IFALGAPLDQ
VVTFSILSGL LGYTFMTFNM VMFRNKWPLG KIKRGYVHPF HPLPTIVLLI LCSTAYFAVF
LGYGTQLSAM MCFYIIASLW FHFRRYKFVR RGDQFTMPWP KPQGY
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