| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3290 |
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| Symbol | |
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| ID | 5324174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3482663 |
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| End bp | 3483637 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640792242 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001328947 |
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| Protein GI | 150398480 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAT CTTCCGACAG CAGGAACGTC CAGCGGGTCG GCTTTCTGCT GGTGCGCAAT
TTTGCACTGA TGAGCTACGC AGCGGCGACG GAGCCGCTGC GTGCGGCCAA CCTTCTGGCC
GCTCGCCCGC TCTATCAGGT CTTTCCGCTT GCACAGGGGG GAGGGACCGT CACTTCGTCG
TCCGGCGTTT CAATCGATTG CGCCGATCTG GAGAGCGATG GAGAAACCTG CCACACCCTC
TTCGTCTGCG CGGGCGGCGA GCCCACCGAC TGGGCGGACA CGTCCGCCGC GCATACGGCG
CTCCGGCGCC TGTCGCGCCT GGGGATTAGG ATCGGGGGCA TATCCAGCGG GGCGTTCGTG
CTCGCCGCCG CGGGTCTTCT CGACAACAAC GACTTCACCA TTCATTGGGA ACACGCGCCC
GCGCTTAAGG AAGCATTTCC CCATCTCAAT CCCCGACATG CGCGTTTCGT GCTCGATGGC
GCGATTGCCA CGTGCGGCGG CGGTGTTGCG CCGCTCGACA TGATGCATGC GATGATCGCC
GAGCGGCTGG GAACCGATTT CGCCCGCCGG GTCAGCGACT GGTATCTGCA CGCGGCCGTG
GCTGAGCCGA CCGCGCCGCA ACGCGGTTCG GTCGCGGAGC GGTTCGGTAC CAATCATCCT
GCCCTGCTTG CCGTGCTCGA GAAGATGGAA ACGGCGATCG AACGGCCACT TGGCCGAACC
GCCATGGCGC GGTTGGCCGG GGTGAGCCCG AGGCATCTTG ACCGGCTGTT CAAGGAGCAT
CGCGGAGCCG GGTTTCTCGA CACTTACCGG GAGATCCGGC TCCGCCACGC CCGAAGGCTC
CTGCAGCAAA GCCCGCTCTC CATCGCGGAG ATCGCCTATG CCACCGGCTT TTCCAGCCCC
GCACATTTTT CGAACGCGTT CAAAGACCTG TTTTCCGAGA CGCCCGGCAG CTTGCGCCGC
CGCAGAGGAG CCTGA
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| Protein sequence | MTTSSDSRNV QRVGFLLVRN FALMSYAAAT EPLRAANLLA ARPLYQVFPL AQGGGTVTSS
SGVSIDCADL ESDGETCHTL FVCAGGEPTD WADTSAAHTA LRRLSRLGIR IGGISSGAFV
LAAAGLLDNN DFTIHWEHAP ALKEAFPHLN PRHARFVLDG AIATCGGGVA PLDMMHAMIA
ERLGTDFARR VSDWYLHAAV AEPTAPQRGS VAERFGTNHP ALLAVLEKME TAIERPLGRT
AMARLAGVSP RHLDRLFKEH RGAGFLDTYR EIRLRHARRL LQQSPLSIAE IAYATGFSSP
AHFSNAFKDL FSETPGSLRR RRGA
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