| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3275 |
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| Symbol | |
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| ID | 5324154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3456417 |
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| End bp | 3458882 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640792223 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_001328934 |
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| Protein GI | 150398467 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCG CGCTTCCTGC ACTTCCTGTC CGCGAGATTC TGCCCGACCT CGGCGAAGCG
CTCCATTCGT CGCGATCCGC CGTTCTGTCG GCTCCGCCCG GCGCCGGCAA GACGACGCTG
GTACCGCTCT TTCTGCTCGG CCAGCCGTGG CGCGGCGACG GCAGGATCAT TCTGCTCGAA
CCGCGAAGGC TCGCCGCACG GGCCGCGGCG GGGCGCATGG CCGAACTTCT GGGGGAGAAG
GTCGGCGAAA CCGTGGGCTA TCGCATGCGG CTGGACAACC GCATATCAGG GAAAACCCGG
ATCGAAGTGG TAACGGAGGG CGTCTTTAGC CGGATGATCC TCGACGATCC CGAACTTTCC
GGCGTAGCAG CGGTGCTTTT CGACGAGTTC CACGAGCGCT CGCTCGACGC GGATTTCGGC
TTGGCGCTGG CCCTCGATGT ACAATCGGCG CTGCGCGACG ATCTCAGGAT CGTGGTCATG
TCCGCAACGC TCGACGTCGA ACGCATCGCC GGCATGATGG GCGACGCGCT CGTTTTGAAA
AGCGAAGGCC GGAGCTTTCC GATTGAAATC CGCTACGCGA GCAGAGATAC CGGAGGAAGG
ATCGAAGATG CGATGGTCCG CACGATCGCC GAGGCGCTTC GATCCGAAGA AGGATCGATC
CTCGCATTCC TCCCCGGCCA GGCGGAGATC GCACGCACGG CCGAGCGTCT CGCCGGGCGC
TTCGGAGACG ATACAGCAAT CGTGCCGCTC TACGGCAATC TGAGCCAGAA GGAACAGGAT
GCGGCGATCC GGCCGGCCCC GAAGGGCACG CGCAAGATCG TGCTGGCGAC CTCGATCGCA
GAGACCTCGA TCACCATCGA TGGCGTCAGG ATCGTCGTCG ACAGCGGGCT GCAGCGTCTG
CCGGTCTTTG AAGCCGCGAC CGGCATCACA CGCCTCGAGA CCGTCCGCGT TTCGAAAGCG
TCGGCCGACC AGCGCGCCGG GCGCGCAGGA AGGACGGAGC CGGGCATCGC AATCCGCCTG
TGGCACTCCG GCCAGACGGC CGCGCTCGCC GCTTTCACAC CGCCGCAGAT CCTGGCCACC
GACCTCTCCG GTCTGCTGCT CGACCTTGCC CATTGGGGCG TGGCCGATCC GTCCGCGCTG
AAGTTCCTCG ATCTGCCGCC GGAGACGACC TTGCGCGAGG CTCGCGACCT GCTCGTCGAA
CTCGGCGCAC TCGACAGCAG CGGCGCGCTG ACGTCCAGAG GCCGTAAGAT CCGCAATCTG
GCGCTGCCGG TTCGGCTTGC GGCAATGGCG GTCGCTGCCG CCGAAGAAGG ACGGGCACAG
GAGGCGTGCC TGATCGCGGT GATGCTCACC GAGCAAGGGC TCGGCGGCAA CAGCGTCGAT
ATCGAGGAGC GGCTGCGCCG GTTCCGCAGC GAGCGAAGCG ATCGCGCCGA AGCCGCGAGG
GGCTTGGCAA GGCGAATGGC CGCAGATCTC GGCGCATCGA AGAAGCCGGC CTCCGGCGCA
GCTCTGCCTG GAACCTTGCT GATGCACGCC TTTCCGGACC GCATTGCGCT GCAACGCGGC
GGGCGCGGGC GCTTCGTCAT GGCAAACGGA CGCGGCGCCG AGCTTCCCGA AATCGAGCGG
CTTGCGGCGG CCGAAATGCT GATCATTGCC GACCTTACCG GAAGAGCCGG CGCCCAGCGC
GTGCTAGCAG CCGCCGAGGT CACCCGTGAG GACGTCGAGG CGCATATGCC GAAAGCGATC
GTTACCGAAG AACAGAGCTT TTTCGATCGG GCAAGCCGGC AGGTGCGCGC GCGCCGGGTG
ACACGGCTCG GGGCGATCAT CTTCGAGGAA AGACCCCTGC CGCGCCCGAG AGGCGAGGCG
GCGGCTCGAG CGCTCGCCGA CGGTATTCGT CAGTTGGGGC TTGCCGCTGT CCCGTTCCCG
AAGGAGGTGG AGCAGCTACG CGACCGCATC GGCTTCCTGC ACCGCTCCAT CGGCGAACCC
TGGCCCGACA TGTCCGACGC GATGCTGATG TCTCGCCTCG ACGAATGGTT CGTCCCCTTC
CAGGCGGAAG CCGGCGGCAT TGACGGAATC AAAGGTCGGG ATCTCGCCGA GGGCCTCCTG
TCGATCGTTC CCTTCGAACT TCAGCGCGAC CTTGCAAGGT TAGCACCTAC GCATTTCGAA
GCGCCGACAG GACAGCGTCA TCCGATCCAC TACGACGGCA GTGAACCGCT GCTGTCGATC
CGCGTTCAGG AGCTCTTCGG GCTGAAAGCG CATCCGACGA TCGGCGCCGG GAAGCTGCCG
TTGCTTCTCG AACTGATTTC ACCCGGCCAT CGCCCGATCC AGACCACCCG AGACCTTCCC
GGTTTCTGGG CGGGATCGTG GAAGGACGTC AGAGCCGACA TGCGCGGCCG CTATCCGAAA
CACCCCTGGC CGGAGGATCC CGCCAACGCC ATGCCGACAA CGCGCGCCAA GCCACGCGGC
GCTTAA
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| Protein sequence | MMRALPALPV REILPDLGEA LHSSRSAVLS APPGAGKTTL VPLFLLGQPW RGDGRIILLE
PRRLAARAAA GRMAELLGEK VGETVGYRMR LDNRISGKTR IEVVTEGVFS RMILDDPELS
GVAAVLFDEF HERSLDADFG LALALDVQSA LRDDLRIVVM SATLDVERIA GMMGDALVLK
SEGRSFPIEI RYASRDTGGR IEDAMVRTIA EALRSEEGSI LAFLPGQAEI ARTAERLAGR
FGDDTAIVPL YGNLSQKEQD AAIRPAPKGT RKIVLATSIA ETSITIDGVR IVVDSGLQRL
PVFEAATGIT RLETVRVSKA SADQRAGRAG RTEPGIAIRL WHSGQTAALA AFTPPQILAT
DLSGLLLDLA HWGVADPSAL KFLDLPPETT LREARDLLVE LGALDSSGAL TSRGRKIRNL
ALPVRLAAMA VAAAEEGRAQ EACLIAVMLT EQGLGGNSVD IEERLRRFRS ERSDRAEAAR
GLARRMAADL GASKKPASGA ALPGTLLMHA FPDRIALQRG GRGRFVMANG RGAELPEIER
LAAAEMLIIA DLTGRAGAQR VLAAAEVTRE DVEAHMPKAI VTEEQSFFDR ASRQVRARRV
TRLGAIIFEE RPLPRPRGEA AARALADGIR QLGLAAVPFP KEVEQLRDRI GFLHRSIGEP
WPDMSDAMLM SRLDEWFVPF QAEAGGIDGI KGRDLAEGLL SIVPFELQRD LARLAPTHFE
APTGQRHPIH YDGSEPLLSI RVQELFGLKA HPTIGAGKLP LLLELISPGH RPIQTTRDLP
GFWAGSWKDV RADMRGRYPK HPWPEDPANA MPTTRAKPRG A
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