Gene Smed_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3272 
Symbol 
ID5324151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3453704 
End bp3454228 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content62% 
IMG OID640792220 
Producthypothetical protein 
Protein accessionYP_001328931 
Protein GI150398464 
COG category[S] Function unknown 
COG ID[COG5321] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCT TATCGATCCA CGGCGATAAT CCGCTTGCAG ACGGACGCCA GTCCGAGCGT 
GCCATGAAGG TGCGCCGCGG GGTCCAGCGG CTGCTGATGG AATTGCGTCA CGCGGCTCTG
CCCGAACTGA CGCTCGCGAG CGGTCGGCGG GCCGATCTCA TTTCGCTCTC GCCAAAGGGC
GAAATCTGGA TCATCGAAAT CAAGACCTCG ATCGAGGACT TTCGCGTCGA TCGCAAGTGG
CCGGAATACC GACTGCACTG CGATCGCCTG TTCTTCGCGA CGCATGCGCA GGTGCCGCTG
GATATTTTCC CGGAAGAATG CGGACTTATG CTTTCCGACG GCTACGGCGC CCATATGCTG
CGCGACGCAC CGGAACACCG CCTGCCGCCA AGCACGCGAA GATCGGTAAC GCAGGCATTT
GCCCGCATAG CTGCGCAGCG CCTGACGCTC GCGGAATGGG CAGCCGATCG GAATGGCGAG
CTCGGCCAGT CGATCTGCGA TATCGTAAGC GGGGGGCGGG ACTAG
 
Protein sequence
MTILSIHGDN PLADGRQSER AMKVRRGVQR LLMELRHAAL PELTLASGRR ADLISLSPKG 
EIWIIEIKTS IEDFRVDRKW PEYRLHCDRL FFATHAQVPL DIFPEECGLM LSDGYGAHML
RDAPEHRLPP STRRSVTQAF ARIAAQRLTL AEWAADRNGE LGQSICDIVS GGRD