| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3260 |
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| Symbol | |
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| ID | 5324139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3440268 |
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| End bp | 3441014 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792208 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001328919 |
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| Protein GI | 150398452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCT TTCCCGCAAT CGACCTCAAA GACGGGCAAT GCGTGCGCCT GAAGCTCGGC
GACATGGAGC AGGCGACGGT CTATAATTCC GACCCGGCCG CGCAGGCCCG CGCTTTTGAG
GAACAGGGCT TCGAATGGCT GCACGTGGTC GACCTGAACG GGGCATTTGC CGGCGAGACG
GTCAACGGTG ATGCTGTCGA CGCCATCCTC AGGGCAACGA AGAACCCGGT GCAGCTCGGC
GGCGGAATCC GCACGCTCGA CCATATAGAG AACTGGCTTG CGCGCGGGCT CAAGCGCGTC
ATCCTCGGCA CCGTCGCAGT GCGCGACCCG GCGCTGGTGA TCGAAGCCTG CCGCAAATTC
CCGGGCAGGA TCGCCGTGGG CATCGATGCG AAGGGCGGCA AGGTCGCGGT CGAAGGCTGG
GCTGAGGCTT CCGAACTCGG CGTGATCGAG CTCGCGCGGA GATTCGAAGG CGCCGGCGTG
GCGGCGATCA TCTATACCGA TATCGACCGC GACGGCATCC TGACAGGCAT CAACTGGGCC
GCGACGCTCG AACTCTCCGA TGCGGTTTCG ATTCCCGTCA TCGCCTCGGG CGGACTCGCC
TCGCTGGACG ATATCCGCCG CATGACCGAG CCGGAAGCGC AAAAACTCGA AGGGGCAATC
TCCGGCCGGG CGCTTTATGA CGGTCGAATC GATCCGAAGG AAGCGCTCGA TCTGATCCGC
GAAGCCAGGA AGGGGATGAT CCGATGA
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| Protein sequence | MILFPAIDLK DGQCVRLKLG DMEQATVYNS DPAAQARAFE EQGFEWLHVV DLNGAFAGET
VNGDAVDAIL RATKNPVQLG GGIRTLDHIE NWLARGLKRV ILGTVAVRDP ALVIEACRKF
PGRIAVGIDA KGGKVAVEGW AEASELGVIE LARRFEGAGV AAIIYTDIDR DGILTGINWA
ATLELSDAVS IPVIASGGLA SLDDIRRMTE PEAQKLEGAI SGRALYDGRI DPKEALDLIR
EARKGMIR
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