| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3259 |
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| Symbol | |
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| ID | 5324138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3439495 |
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| End bp | 3440271 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792207 |
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| Product | imidazole glycerol phosphate synthase subunit HisF |
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| Protein accession | YP_001328918 |
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| Protein GI | 150398451 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGA AAGCCCGTGT GATCCCCTGC CTCGACGTCA AGGACGGCCG TGTCGTCAAA
GGCGTCAATT TCGTCGATCT CATCGATGCC GGCGATCCGG TGGAGGCGGC ACGCGCCTAT
GACGCGGCCG GCGCTGACGA ACTCTGTTTT CTCGACATCA CCGCCTCCTC CGACAATCGC
GAAACGATCT TCGACGTTAT CGCCCGCACC GCCGAACAGT GCTTCATGCC GCTGACCGTC
GGGGGCGGCG TGCGGCAGGT CTCCGATATC CGCAAGCTCC TGCTCGCCGG CGCCGACAAG
GTGTCCATCA ACACGGCTGC GGTGAAGAAC CCGGACTTCG TGGCGGAAGC CGCCGACAAG
TTCGGCGACC AGTGCATCGT CGTCGCCATC GACGCCAAGA AAGTCTCGGA TCCAGGTGAA
ACCGACCGGT GGGAGATCTT CACCCATGGC GGGCGGCAGC CTACAGGCAT GGATGCAGTC
GAATTCGCAC GGAAGGTCGT CGATCTCGGC GCCGGCGAGA TCCTCCTGAC GTCGATGGAT
CGCGACGGCA CCAAAAGCGG CTACGACATC AGCCTGACGA GGACGATTGC TGACGCGGTG
CGTGCGCCGG TCATCGCGTC GGGGGGCGTG GGTACGCTCG ATCATCTGGT CGAAGGTATC
CGCGACGGCC ACGCGACCGC CGTGCTCGCG GCATCCATTT TTCACTTCGG AACATACAGC
ATCGGTGAGG CGAAGCGCCA CATGGCCGAG CACGGCGTCG CCATGCGTCT CGATTGA
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| Protein sequence | MTLKARVIPC LDVKDGRVVK GVNFVDLIDA GDPVEAARAY DAAGADELCF LDITASSDNR
ETIFDVIART AEQCFMPLTV GGGVRQVSDI RKLLLAGADK VSINTAAVKN PDFVAEAADK
FGDQCIVVAI DAKKVSDPGE TDRWEIFTHG GRQPTGMDAV EFARKVVDLG AGEILLTSMD
RDGTKSGYDI SLTRTIADAV RAPVIASGGV GTLDHLVEGI RDGHATAVLA ASIFHFGTYS
IGEAKRHMAE HGVAMRLD
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