Gene Smed_3257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3257 
Symbol 
ID5324136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3438155 
End bp3439150 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content61% 
IMG OID640792205 
Productpantothenate kinase 
Protein accessionYP_001328916 
Protein GI150398449 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1072] Panthothenate kinase 
TIGRFAM ID[TIGR00554] pantothenate kinase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG CCGCGAAAGA CATCGAACCG GCCGACATTC CGGGCAATCT TCAGGGGGGC 
GAATATTCGC CCTATCACGT CTTCTCCGCG GAGGAATGGT CGCGCTTTCG CGCCGATACG
CCGCTGACGC TGACTGCCGA CGAGGTGCAG CGCCTCCGCT CGCTCAACGA CCCGGTCGAT
CTCGACGAAG TGCGCCGGAT CTACCTCTCG CTGTCGCGGC TCCTCTCGGC CCATGTGGAG
GCGTCGCAGA TTCTCTTCCG GCAGCGGACG CGCTTCCTCA GCATGTCGAA CGAGACGAAA
ACGCCGTTCG TCATAGGCGT CGCCGGCTCC GTCGCCGTCG GCAAATCGAC GACGGCGCGC
ATTCTTGCAG AGCTTCTTGC ACGCTGGCCC TCCAGCCCGA AGGTCGACCT CGTCACCACC
GACGGCTTCC TCTATCCGAA CGCCGTTTTG CAGCGGGAAA GCCTGATGGA TCGCAAGGGC
TTCCCCGAGA GCTACGATAT CGGTGCGCTG CTCAGATTCC TTTCCGCGAT CAAAGCCGGA
CGGCCGAACG TCAAGGCTCC GACCTATTCG CACCTGACCT ACGACGTGAT CCCCGACCAG
TTCCAGCTGG TCGACCGGCC GGACATCCTG GTTTTCGAGG GAATAAACGT CCTGCAGTCG
CGCGATCTGC CGGCCGATGG AAAGATCGTG CCGATGGTCT CGGATTTCTT CGACTTCTCG
ATCTATATCG ACGCTGAGGA AAGCCTCATC CATAGCTGGT ATGTGAACCG CTTCATGAGG
CTGCGCGAAA CGGCGTTCCA GAATCCGCAG TCCTTCTTCC ATCGCTATGC GACGATCAGC
GAGGATGCGG CCCGGGCGAT CGCCGAGGGC CTGTGGCACA ACATCAACCT CAAGAACCTG
CACCAGAACA TTCTGCCGAC GCGGCCGCGC GCCGATCTCA TCCTGCAGAA GGGCCCAAGT
CACCTGACGC AGACCGTGGC TCTCAGGAAG CTTTAG
 
Protein sequence
MSIAAKDIEP ADIPGNLQGG EYSPYHVFSA EEWSRFRADT PLTLTADEVQ RLRSLNDPVD 
LDEVRRIYLS LSRLLSAHVE ASQILFRQRT RFLSMSNETK TPFVIGVAGS VAVGKSTTAR
ILAELLARWP SSPKVDLVTT DGFLYPNAVL QRESLMDRKG FPESYDIGAL LRFLSAIKAG
RPNVKAPTYS HLTYDVIPDQ FQLVDRPDIL VFEGINVLQS RDLPADGKIV PMVSDFFDFS
IYIDAEESLI HSWYVNRFMR LRETAFQNPQ SFFHRYATIS EDAARAIAEG LWHNINLKNL
HQNILPTRPR ADLILQKGPS HLTQTVALRK L