| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3253 |
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| Symbol | |
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| ID | 5324132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3434539 |
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| End bp | 3436149 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792201 |
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| Product | phosphoenolpyruvate carboxykinase |
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| Protein accession | YP_001328912 |
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| Protein GI | 150398445 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
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| TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGC TTGGCAGCCG CAACCCCTCT ATAGGACTGG AATCGATCGG ATTTTCTGAC
CTTTCGGTCG TCCGGTACAA CTTCGAGGCG GCGCAGCTTT ACGAAGAAGC TCTGGCCCAT
GGTGAAGCCG AATTGACGGC CCATGGCGCG CTTTGCGCCC GTACCGGCCA GCACACAGGT
CGCTCCCCAA AGGACAAATA CGTCGTGCGC GACGCCAACA CGGCCGACCA GATCTGGTGG
GACAACAACA GTGCCATCTC GCCGGAGAAC TTCGACCGGC TGCGTCAGGA CATGCTCGCG
CATGCAAAAG GCATGTCGCT CTACGTGCAG GATCTCGTCG GCGGTGCCGA CCCCGAGAAT
GCGCTGCCCA CGCGCGTCGT CACGGAGTTC GCCTGGCATT CACTGTTCAT CCGCAATCTA
TTGATCCGCC CCGAGCGTGA GGCACTCTCG TCTTTCCAGC CAATGCTGAC GATCATCGAT
CTGCCGAGCT TCAAGGCTAG TCCTGAGCGC CACGGCTGCC GCAGCGAAAC GGTCATTGCT
TGCGATCTGA CCAACGGTCT GGTGCTGATC GGCGGCACCT CCTATGCGGG GGAGATGAAG
AAGTCTGTCT TCACCGTGCT CAACTACCTG TTGCCCAGGA AATCGGTGAT GCCGATGCAC
TGCTCGGCCA ATGTCGGCCC TGCCGGCGAC ACCGCCATCT TCTTCGGGCT CTCCGGCACC
GGCAAAACGA CGCTTTCGGC TGATCCGAAC CGCACTCTGA TCGGTGACGA CGAGCACGGC
TGGGGCGAAA AGGGCGTCTT CAATTTCGAG GGCGGCTGCT ACGCCAAGGC CATCCGTCTG
TCGGAAGCGG CTGAGCCTGA GATTTTCGCG ACGACGCAGC GTTTCGGGAC GGTTATGGAG
AACGTCGTAC TCGACGAGCG GCGCATGCCG GACTTCGAAG ACGGGTCTCT GACCGAAAAC
ACCCGCTGCG CCTATCCGCT TCATTTCATT CCGAATGCCA GCAAGACCGG CACGGCGCCG
CAGCCGCGCA CGATCATCAT GCTGACGGCT GATGCCTTCG GCGTATTGCC GCCGATCGCA
AAGCTGACGC CGGAACAGGC CATGTACCAC TTCCTTTCCG GCTACACCGC CAAGGTTGCC
GGTACCGAAA AGGGCGTTAC AGAGCCGGAA GCGACGTTCT CAACCTGCTT CGGCGCGCCC
TTCATGCCCC GTCATCCGTC CGAGTACGGC AATTTGCTCA AGGAACTCAT CGCCCGCAAC
GGCGTCACCT GCTGGCTTGT CAACACCGGC TGGACCGGCG GCGCCTATGG AACCGGAAGC
CGCATGCCGA TCAAGGTGAC GCGCGCGCTC CTTTCGGCAG CGCTCGACGG ATCGCTGAAC
AGCGCCTCGT TCCGCAGCGA TGCGAATTTC GGCTTCGCGG TGCCGGTATC GGTACCGGGC
GTCGAGTCCC GCATCCTCGA TCCACGCTCG ACCTGGGCGG ACGGCGCCGC CTATGACGCG
CAGGCACGCC GCCTCGTCGA CATGTTCATC GCCAATTTCG CCAAGTTCGA GAGCCACGTG
GATGGCAGCG TGCGCGATGC CGCGCCCGGT GCCAGGATAG CCGCCGAATA A
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| Protein sequence | MEELGSRNPS IGLESIGFSD LSVVRYNFEA AQLYEEALAH GEAELTAHGA LCARTGQHTG
RSPKDKYVVR DANTADQIWW DNNSAISPEN FDRLRQDMLA HAKGMSLYVQ DLVGGADPEN
ALPTRVVTEF AWHSLFIRNL LIRPEREALS SFQPMLTIID LPSFKASPER HGCRSETVIA
CDLTNGLVLI GGTSYAGEMK KSVFTVLNYL LPRKSVMPMH CSANVGPAGD TAIFFGLSGT
GKTTLSADPN RTLIGDDEHG WGEKGVFNFE GGCYAKAIRL SEAAEPEIFA TTQRFGTVME
NVVLDERRMP DFEDGSLTEN TRCAYPLHFI PNASKTGTAP QPRTIIMLTA DAFGVLPPIA
KLTPEQAMYH FLSGYTAKVA GTEKGVTEPE ATFSTCFGAP FMPRHPSEYG NLLKELIARN
GVTCWLVNTG WTGGAYGTGS RMPIKVTRAL LSAALDGSLN SASFRSDANF GFAVPVSVPG
VESRILDPRS TWADGAAYDA QARRLVDMFI ANFAKFESHV DGSVRDAAPG ARIAAE
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