| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3227 |
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| Symbol | |
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| ID | 5324106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3402576 |
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| End bp | 3403565 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640792175 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001328886 |
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| Protein GI | 150398419 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATAG CCAAGCGCAT TCTTTCCCGC CGGGCCTTCA ATGCCCTGGC CGGCGCCGCA
TTCGTTGCAG CAATGATGCC TGCGACCTCT TTCGCGCAGG ACGTCACGAT TCCGATCATC
GTCAAGGACA CCACGTCCTT CTATTGGCAG ATCGTCCTTG CGGGCGCGCG CGCCGCCGGC
AAGGACCTCG GCGTCAATGT GCCGGAACTC GGAGCCCAGT CGGAAGCGGA CATCAACGGC
CAGATCACCA TCCTCGAAAA CGCCGTCGCG AGTGCCCCGG CAGCAGTTGT GATCGCTCCG
ACGGAGTTCA AGGCACTCGG CAAGCCTGTC GACGAGGCCG CCAAATCGGT TCCGGTGATC
GGCATCGATT CAGGCGCCGA TTCCAAGGCG TTCACCTCGT TCCTGACGAC CGACAATGTC
CAAGGCGGGC GCATCGCCGC CGACGGCCTC GCGGCTGCAA TCAAGGAGGC GACCGGAAAG
GAAGAGGGTG AAATCGCGAT CATCACCAGC CTGCCGGGCG TCGGCTCGCT CGATCAGCGC
CGCGAAGGTT TTCTCGATCA GATCAAGACG AAATATCCCG GTCTGAAAGT CGTCGCCGAC
AAATATGCCG ACGGTCAGGC AACGACCGGT CTCAATATCA TGACCGACCT GATCACAGCC
AACCCCAACC TCGTCGGCGT TTTCGCATCC AATCTGATCA TGGCGCAGGG CGTCGGCCAG
GCGATCGCCG AGAACAAGCT CGGCGACAAG ATCAAGGTGA TAGGTTTCGA CAGCGACGAA
AAGACGGTGG GTTTCCTCAA GGAGGGCGTG CTGGCCGGCC TCGTCGTCCA GGATCCCTAT
CGCATGGGCT ATGACGGCGT GAAGACGGCC TTGGCAGTCT CCAAGGGCGA GAAGGTCGAA
GCCAATGTCG ACACCGGCGC GAACCTGGTC ACCAAGGCCA ATATGAGCGA GCCGAAGATC
GACGCGCTCT TGAACCCGAA GGTCAACTGA
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| Protein sequence | MSIAKRILSR RAFNALAGAA FVAAMMPATS FAQDVTIPII VKDTTSFYWQ IVLAGARAAG
KDLGVNVPEL GAQSEADING QITILENAVA SAPAAVVIAP TEFKALGKPV DEAAKSVPVI
GIDSGADSKA FTSFLTTDNV QGGRIAADGL AAAIKEATGK EEGEIAIITS LPGVGSLDQR
REGFLDQIKT KYPGLKVVAD KYADGQATTG LNIMTDLITA NPNLVGVFAS NLIMAQGVGQ
AIAENKLGDK IKVIGFDSDE KTVGFLKEGV LAGLVVQDPY RMGYDGVKTA LAVSKGEKVE
ANVDTGANLV TKANMSEPKI DALLNPKVN
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