Gene Smed_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3221 
Symbol 
ID5324100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3395649 
End bp3396245 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content62% 
IMG OID640792169 
Productnitroreductase 
Protein accessionYP_001328880 
Protein GI150398413 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGAAA TCAACCATAG AAAAGCCGAT CACCCCATAC ACTCGATCTT TCTGGAGCGC 
TGGTCACCGC GAGCCTTCAC CGGCGAGGAG ATAGGCGAAA AGGATCTGCT CGCGCTTTTC
GAAGCGGCGC GTTGGGCCCC TTCGGCCAGC AATCTCCAGC CTTGGCGCTT CGTCTATGCC
CGTCGAGGCA CCGGGCACTT CGCTCGCCTG CTGTCGACCC TCGACGAAGG CAACCAACGC
TGGGCAAAGA ACGCCTCCGC ATTGGTCATC ATCCTTTCGA AAACCCACAG AACCACGTCG
ACCGGCGAAG TGCGGCCGGC CTATACGCAC GCCTTCGATA CCGGAGCGGC CTGGTTCGCA
CTCGCGCTGC AGACGCAGCT TTCCGGCTGG CATGCCCATG CTATGGCGGG CGTCGACAGG
GAAAAGGCGA TACAGGTGCT GGGCGTGCCG GAGCATTACC GGGTAGAGGC AGCCGTTGCG
ATCGGCCGCA TCGCCGATCC CTCGACCCTG CCGGACGACC TGCGCGAACG CGAGAAACCA
AGCCAGCGCC GGCCTTTCAG CGAATTCGTC TTCGAAGGGC ACTTCAAGGG CGAATGA
 
Protein sequence
MTEINHRKAD HPIHSIFLER WSPRAFTGEE IGEKDLLALF EAARWAPSAS NLQPWRFVYA 
RRGTGHFARL LSTLDEGNQR WAKNASALVI ILSKTHRTTS TGEVRPAYTH AFDTGAAWFA
LALQTQLSGW HAHAMAGVDR EKAIQVLGVP EHYRVEAAVA IGRIADPSTL PDDLREREKP
SQRRPFSEFV FEGHFKGE