Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3221 |
Symbol | |
ID | 5324100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3395649 |
End bp | 3396245 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792169 |
Product | nitroreductase |
Protein accession | YP_001328880 |
Protein GI | 150398413 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGAAA TCAACCATAG AAAAGCCGAT CACCCCATAC ACTCGATCTT TCTGGAGCGC TGGTCACCGC GAGCCTTCAC CGGCGAGGAG ATAGGCGAAA AGGATCTGCT CGCGCTTTTC GAAGCGGCGC GTTGGGCCCC TTCGGCCAGC AATCTCCAGC CTTGGCGCTT CGTCTATGCC CGTCGAGGCA CCGGGCACTT CGCTCGCCTG CTGTCGACCC TCGACGAAGG CAACCAACGC TGGGCAAAGA ACGCCTCCGC ATTGGTCATC ATCCTTTCGA AAACCCACAG AACCACGTCG ACCGGCGAAG TGCGGCCGGC CTATACGCAC GCCTTCGATA CCGGAGCGGC CTGGTTCGCA CTCGCGCTGC AGACGCAGCT TTCCGGCTGG CATGCCCATG CTATGGCGGG CGTCGACAGG GAAAAGGCGA TACAGGTGCT GGGCGTGCCG GAGCATTACC GGGTAGAGGC AGCCGTTGCG ATCGGCCGCA TCGCCGATCC CTCGACCCTG CCGGACGACC TGCGCGAACG CGAGAAACCA AGCCAGCGCC GGCCTTTCAG CGAATTCGTC TTCGAAGGGC ACTTCAAGGG CGAATGA
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Protein sequence | MTEINHRKAD HPIHSIFLER WSPRAFTGEE IGEKDLLALF EAARWAPSAS NLQPWRFVYA RRGTGHFARL LSTLDEGNQR WAKNASALVI ILSKTHRTTS TGEVRPAYTH AFDTGAAWFA LALQTQLSGW HAHAMAGVDR EKAIQVLGVP EHYRVEAAVA IGRIADPSTL PDDLREREKP SQRRPFSEFV FEGHFKGE
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