Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3219 |
Symbol | |
ID | 5324098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3392624 |
End bp | 3393001 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792167 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001328878 |
Protein GI | 150398411 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCAT TCGGTGAGGC CGTACGGGAG CTCCGGCGGC GCAAGGGCGT GACGCAGAAG GAGATGGCGG CGGCCATCGG GGTTTCGCCG GCCTACCTCT CGGCTCTCGA ACATGGCAAG CGGGGCGCGC CGAGCTTCGA TTTCCTCCAG CGCGTTGCCG GCTATTTCAA CGTGATCTGG GACGAGGCCG ACGAACTTTT CCGGATCGCG CATATTTCAG ACCCGAAAGT GGTGCTCGAC ACCTCCGGTC TGCCGCCCGG TCATACCGCC TTCGCCAATC GTTTGAGCGG GCAGATTCGC AGCCTCTCGG CGGAGACGAT CCGGGCACTG GAAGATGTTT TGGAAAAAGC CACATTTCCT GATAAGGACA GGGGATGA
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Protein sequence | MTPFGEAVRE LRRRKGVTQK EMAAAIGVSP AYLSALEHGK RGAPSFDFLQ RVAGYFNVIW DEADELFRIA HISDPKVVLD TSGLPPGHTA FANRLSGQIR SLSAETIRAL EDVLEKATFP DKDRG
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