Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3213 |
Symbol | |
ID | 5324092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3388060 |
End bp | 3388788 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640792161 |
Product | DNA polymerase III subunit epsilon |
Protein accession | YP_001328872 |
Protein GI | 150398405 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAAA TCATCTTCGA TACGGAAACG ACCGGTCTCG ACAACCGCGA GGACCGGGTC ATCGAGATCG GCGGAATCGA GCTCGAGAAT CAGTTTCCGA CGGGGCGCAC GATCCATATC TATATCAATC CGGGCGATCG CAAGGTTCAT CCGGAAGCGC TCGCCGTCCA CGGCATTACG GATGATTTCC TGAAGGACAA GCCGTCCTTC GCCGAGATAG CACAGGAAAT CGTCGATTTC TTCGGCGATG CCCGCTGGGT CGCCCACAAC GCGACCTTCG ATATGGGCTT CATCAATGCG GAGTTTGAGC GGCTCGGTCT GCCGCCGGTT GGCAGCGACA GGGTGATCGA CACGCTATCC CTTGCCCGGC GCAAGCACCC GATGGGGCCG AATTCGCTCG ATGCGCTCTG CCGCCGCTAC GGTATCGACA ACTCCCATCG AACCAGGCAC GGGGCGCTGC TCGACTCCGA ACTCCTCGCC GAAGTCTATA TTGAGATGAT CGGGGGGCGC CAGGCGGCGC TGGGTCTCGT GATGACGGAG ACGGGTGGAC GGTCGCTCGA AGCCGACGAC GGGCCGGTTA TCATCGTCGG GAGGGAGCGG CCTTTGCGGC CACGGCTGAC GGAGGCCGAA ATCGCTGCTC ATGCGGCGCT CGTCTCGAAG ATCGGCGCAA ATGCAATATG GGCAAAATTC AGCGAAGCTG AAGATATCCT GAGATCGGAA GCCGTTTAG
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Protein sequence | MREIIFDTET TGLDNREDRV IEIGGIELEN QFPTGRTIHI YINPGDRKVH PEALAVHGIT DDFLKDKPSF AEIAQEIVDF FGDARWVAHN ATFDMGFINA EFERLGLPPV GSDRVIDTLS LARRKHPMGP NSLDALCRRY GIDNSHRTRH GALLDSELLA EVYIEMIGGR QAALGLVMTE TGGRSLEADD GPVIIVGRER PLRPRLTEAE IAAHAALVSK IGANAIWAKF SEAEDILRSE AV
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