| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3204 |
|---|
| Symbol | |
|---|
| ID | 5324083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 3377873 |
|---|
| End bp | 3379744 |
|---|
| Gene Length | 1872 bp |
|---|
| Protein Length | 623 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640792152 |
|---|
| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
|---|
| Protein accession | YP_001328863 |
|---|
| Protein GI | 150398396 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
|---|
| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATT ATGATGTCAT CGTAATTGGC GGAGGCCATG CGGGTTGTGA GGCCGCAGCG
GCGTCGGCTC GGCTCGGCGC GCGCACGCTG CTGATCACGC ATAAGAAAGA TACGATCGGG
GTCATGTCCT GCAACCCCGC CATCGGCGGA TTAGGCAAGG GACACCTTGT CCGCGAGATT
GATGCTCTCG ATGGCCTTAT GGGGCGCGTT GCTGACGCAG CCGGCATCCA GTTTAGGCTG
CTCAATCGAC GCAAGGGACC TGCGGTCCGG GGGCCACGCA CGCAGGCTGA CAGAAAACTA
TATCGTGAGG CGATGCAGCG TGAGATTGCT TCGATCGAGA ATCTCGACGT CGCTGAGGGC
GATGCGTTTG ACCTGCAGAC GGAGGACGGG GTTGTTTGTG GGGCAGTGAT GAAGGACGGA
CGAAGCTTCC GGGCAGCATC CGTAGTCCTC ACAACAGGTA CATTCCTCAG AGGGCTTATC
CATATAGGTG ATCGGAAAAT GCCGGCCGGT CGCGTCGGTG AGCAGCCGTC CGTCGGCCTT
TCAGAAACGC TGGCACGTTT CGGCCTGCAG CTTGGCCGCT TGAAGACCGG CACGCCGGCA
CGCCTGGATG GACGTACCAT CGATTGGGGC CGTGTCGGGC GTCAGGGTCC CGACGAAAAT
CCGGTGCCCT TCTCATTCAT GACCGACGCG ATCGTCAACC GTCAGATTGA CTGCGGGGTG
ACCCGGACGA CGGATGCGAC GCACAAGATT ATCGCCGACA ACATTCACCG TTCGGCGATG
TACTCGGGTC AAATTGAAGG TGTGGGCCCC CGATACTGTC CTTCGATTGA GGACAAGATT
GTTCGTTTCG GTGAAAGGGA CGGGCACCAG ATTTTCCTGG AGCCGGAGGG GTTGGACGAT
GACACCGTCT ATCCGAACGG GATTTCGACT TCTCTCCCGG AGGATGTGCA GGATGCCTTC
ATTCGGACCA TCCCAGGACT TGAACAGGTC ACGATACTTC AGCCGGGCTA TGCCATCGAG
TATGATCATG TAGACCCTAG GGAACTTGAA CCGTCTCTCG GCGTGCGTAG GATGCCGGGG
CTGTTTCTTG CAGGACAGAT CAATGGCACG ACCGGCTATG AGGAAGCTGG CGCGCAAGGT
CTCGTCGCCG GTCTGAATGC CGCGCTCCGT GCAGCTGAAC GCGCTCCGTT CTTCTTCAGC
CGAACCGACT CCTATATCGG GGTGATGATC GATGACCTAA CTTCAAGAGG AATAGCTGAG
CCGTATCGCA TGTTCACGTC CCGTGCTGAA TACCGGCTGT CCCTGCGGGC GGACAACGCC
GACATGCGAC TTACGCCTGT TGGTATCGAA CTCGGATGCG TTGGCAATGC TCGCCTAACC
CGCTTTCAAC AGTGGAAGTC TGCCTATGAG GCCGGTCGCA CGCTCCTGCA ATCGCTTTCA
GTGACACCGA ATGAAGGCAA GCGTTTCGGC TTGAAGCTTA ATCAGGACGG GCAGCGCCGC
ACGGCATTCG AGATTCTCTC CTATCCGGAT CAATCGATCG AGGGTCTGAG GCCGCTTTGG
CCGGAGCTTC AGGCCATTGC GACTGATGTT GCCGCCGCGT TGGAGATTGA TGCGGCCTAT
GCTGTCTATA TGGAACGGCA GGCCGCCGAC ATCATCGGAG TACAGAGAGA AGAGAGTACA
GCCATTCCCG AGGCTTTTGA TTACGAATCG CTGCCTGGGC TTTCGAATGA GCTGAAGCAG
AAGCTCGCGC AGCAGAAGCC GCGCAACCTT TCCCAGGCGA TGAAGGTCGA CGGCGTGACA
CCCGCGGCCA TTTCACTGAT CCTGTCATGG CTGCGACGAG AAGACCGCCG TTCGAAGCGT
GTAGGGGGTT GA
|
|---|
| Protein sequence | MADYDVIVIG GGHAGCEAAA ASARLGARTL LITHKKDTIG VMSCNPAIGG LGKGHLVREI
DALDGLMGRV ADAAGIQFRL LNRRKGPAVR GPRTQADRKL YREAMQREIA SIENLDVAEG
DAFDLQTEDG VVCGAVMKDG RSFRAASVVL TTGTFLRGLI HIGDRKMPAG RVGEQPSVGL
SETLARFGLQ LGRLKTGTPA RLDGRTIDWG RVGRQGPDEN PVPFSFMTDA IVNRQIDCGV
TRTTDATHKI IADNIHRSAM YSGQIEGVGP RYCPSIEDKI VRFGERDGHQ IFLEPEGLDD
DTVYPNGIST SLPEDVQDAF IRTIPGLEQV TILQPGYAIE YDHVDPRELE PSLGVRRMPG
LFLAGQINGT TGYEEAGAQG LVAGLNAALR AAERAPFFFS RTDSYIGVMI DDLTSRGIAE
PYRMFTSRAE YRLSLRADNA DMRLTPVGIE LGCVGNARLT RFQQWKSAYE AGRTLLQSLS
VTPNEGKRFG LKLNQDGQRR TAFEILSYPD QSIEGLRPLW PELQAIATDV AAALEIDAAY
AVYMERQAAD IIGVQREEST AIPEAFDYES LPGLSNELKQ KLAQQKPRNL SQAMKVDGVT
PAAISLILSW LRREDRRSKR VGG
|
|---|
| |