Gene Smed_3201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3201 
Symbol 
ID5324080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3375491 
End bp3376381 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content61% 
IMG OID640792149 
ProductparB-like partition protein 
Protein accessionYP_001328860 
Protein GI150398393 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATG ACAGCTCCAA GCGACGTCTT GGTCGTGGCC TAGCAGCGTT AATCGGGGAA 
ATGGACCAGC CGTTGCAAAC CGGCAGTGCT CCCGTCTCTC CGGTCAGCGC GGACCGGCGT
ATCCCGATAG AGTTCGTTTC CCGCAATCCT CGTAACCCTC GGCGGCAGTT TGACGAGGCT
GAGCTCCAGG ACCTCGCAAG CTCGATCCGT CAGCACGGGA TCGTCCAGCC AGTCGTCGTC
CGCACGATTG GGTCCGACCG CTATGAAATT ATTGCAGGCG AACGGCGCTG GAGGGCGGCG
CAGCTTGCAG GCTTCACCGA AATACCTGTT ATCGTGCGCG ATGTGGACGA CAGGACGGCG
CTTGAGATTG CGATTGTCGA GAATGTCCAG CGGTCCGACC TCAATCCCCT CGAAGAGGCG
CTTGGCTACG AACAGCTGAT CGCGGAGCAT GGATACACGC AGAACGATCT CGGCGATATC
ATCGGCAAGA GCCGGAGCCA TGTTGCGAAC AGCCTGCGCC TGCTAAAACT GCCGGAGCCA
GTCCGCGATA TGCTGTCCGA CGGCAGCCTC TCCGCCGGCC ATGCCCGTGC GCTCATACCC
ACCTCCGACC CGGTCGCATT GGCGCGCGCA GTGGTGGCAA AGGGACTTTC GGTCCGCGAA
GTCGAGAGGT TGGCGCAGAA CGACATAAGG TCGCAGAACG ATCCCAATTA TGCGAAAGCG
CGCCAGCGCG ATGAGAAGGA CGCCGATACA CTGGCCTTGG AGCGGACCTT GTCGGATAGT
CTCGGCCTCG AGGTGACCGT CAACCACAAG GCCAGTGGTG GCCACCTCAA GATCACGTAT
AAGACGCTCG ATCAGCTGGA AGAGATCTGC AGGCTGCTCG AGCGGCGCTG A
 
Protein sequence
MNDDSSKRRL GRGLAALIGE MDQPLQTGSA PVSPVSADRR IPIEFVSRNP RNPRRQFDEA 
ELQDLASSIR QHGIVQPVVV RTIGSDRYEI IAGERRWRAA QLAGFTEIPV IVRDVDDRTA
LEIAIVENVQ RSDLNPLEEA LGYEQLIAEH GYTQNDLGDI IGKSRSHVAN SLRLLKLPEP
VRDMLSDGSL SAGHARALIP TSDPVALARA VVAKGLSVRE VERLAQNDIR SQNDPNYAKA
RQRDEKDADT LALERTLSDS LGLEVTVNHK ASGGHLKITY KTLDQLEEIC RLLERR