Gene Smed_3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3199 
Symbol 
ID5324078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3373867 
End bp3374412 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content63% 
IMG OID640792147 
Producthypothetical protein 
Protein accessionYP_001328858 
Protein GI150398391 
COG category[S] Function unknown 
COG ID[COG5468] Predicted secreted (periplasmic) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGT CTGATTTAGC TGGCTTTCGT CGTCGGTCGC TGAGCTTTGT AGCCGGCGCA 
TTGTCGCTCG CCGCTATCGG TGGCTGCCAG GTCAGGCCGC TTTATTCCGA CGGTCCGACC
GGCTCGGCTT CGACGGCGCT CGCCGCAATC GAAATTTCGG ATGCCAACGA CCGCGTCGAG
CAAGAGGTCC GGAACGCTCT CGTCTTTCTA ACCTCGCGTG GACAGGGCGA GCCGGTCAAT
CCGCAATACC ATCTCGCGCT CAGCGTCTCG CACCGGACTA TGGGCGTGCT GTACGAGAGC
ACGGATAACG ACGATGACGA CGACGATGCC GGAGCGGGCC GCGTCGTCGT AAAAGCCGAT
TACAATCTGA CGAGAACAGC CACTGGCGAG ACGGTGAAGG CGGGCAACCG CGCGGCCGTA
GCGCTGGTCG ACTTCCCCCA GCAGGAATTC GCCAAGATTC GCGCCATCCG CGATGGCGAG
AATCGCGCCG CGAAGGAACT GGCGGAGATT ATCGGCGCCG ATCTCGCAGC CGCCCTCGGC
CGCTGA
 
Protein sequence
MSLSDLAGFR RRSLSFVAGA LSLAAIGGCQ VRPLYSDGPT GSASTALAAI EISDANDRVE 
QEVRNALVFL TSRGQGEPVN PQYHLALSVS HRTMGVLYES TDNDDDDDDA GAGRVVVKAD
YNLTRTATGE TVKAGNRAAV ALVDFPQQEF AKIRAIRDGE NRAAKELAEI IGADLAAALG
R