Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3199 |
Symbol | |
ID | 5324078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3373867 |
End bp | 3374412 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640792147 |
Product | hypothetical protein |
Protein accession | YP_001328858 |
Protein GI | 150398391 |
COG category | [S] Function unknown |
COG ID | [COG5468] Predicted secreted (periplasmic) protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTGT CTGATTTAGC TGGCTTTCGT CGTCGGTCGC TGAGCTTTGT AGCCGGCGCA TTGTCGCTCG CCGCTATCGG TGGCTGCCAG GTCAGGCCGC TTTATTCCGA CGGTCCGACC GGCTCGGCTT CGACGGCGCT CGCCGCAATC GAAATTTCGG ATGCCAACGA CCGCGTCGAG CAAGAGGTCC GGAACGCTCT CGTCTTTCTA ACCTCGCGTG GACAGGGCGA GCCGGTCAAT CCGCAATACC ATCTCGCGCT CAGCGTCTCG CACCGGACTA TGGGCGTGCT GTACGAGAGC ACGGATAACG ACGATGACGA CGACGATGCC GGAGCGGGCC GCGTCGTCGT AAAAGCCGAT TACAATCTGA CGAGAACAGC CACTGGCGAG ACGGTGAAGG CGGGCAACCG CGCGGCCGTA GCGCTGGTCG ACTTCCCCCA GCAGGAATTC GCCAAGATTC GCGCCATCCG CGATGGCGAG AATCGCGCCG CGAAGGAACT GGCGGAGATT ATCGGCGCCG ATCTCGCAGC CGCCCTCGGC CGCTGA
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Protein sequence | MSLSDLAGFR RRSLSFVAGA LSLAAIGGCQ VRPLYSDGPT GSASTALAAI EISDANDRVE QEVRNALVFL TSRGQGEPVN PQYHLALSVS HRTMGVLYES TDNDDDDDDA GAGRVVVKAD YNLTRTATGE TVKAGNRAAV ALVDFPQQEF AKIRAIRDGE NRAAKELAEI IGADLAAALG R
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