Gene Smed_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3198 
SymbolleuS 
ID5324077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3371250 
End bp3373880 
Gene Length2631 bp 
Protein Length876 aa 
Translation table11 
GC content63% 
IMG OID640792146 
Productleucyl-tRNA synthetase 
Protein accessionYP_001328857 
Protein GI150398390 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0495] Leucyl-tRNA synthetase 
TIGRFAM ID[TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCG AACGATACAA TCCGCGCGAT GCCGAACCGC GCTGGCAGCA GCAATGGGAA 
GCGGGCAAGA TCTTCGAGAC GAAGAACGAC GATCCGCGCG AGAAATATTA CGTGCTGGAA
ATGTTCCCCT ATCCGTCCGG ACGGATTCAC ATGGGACATG TGCGCAATTA CACGATGGGG
GACGTGGTCG CCCGTTACAA GCGGGCGCGC GGCTTCAACG TACTCCACCC GATGGGCTGG
GACGCTTTCG GCATGCCGGC GGAAAACGCC GCGATGGAGC GCGGCGTCCA TCCGGCGAGC
TGGACGTACC AGAACATCGC CTCGATGAAG GCGCAGCTCA AGGTCATGGG GCTTTCGCTC
GACTGGAGCC GCGAATTCGC GACTTGCGAT CCGGAATATT ATCAGCGTCA GCAGCACCTC
TTCCTCGATT TCCTGGAAAA GGGGCTGGTC TACCGCAAGC AGTCGAAGGT CAACTGGGAC
CCGGTCGACA ACACCGTGCT TGCCAACGAG CAGGTGATCG ACGGCCGCGG ATGGCGCTCC
GGCGCGCTCG TCGAACAGCG CGAGCTGACG CAATGGTTCT TCCGCATCAC CGACTTCAGC
CAGGATCTGC TCGACTCGCT CGATACGCTC GACGAGTGGC CGGAGAAGGT CCGGCTGATG
CAGAAAAACT GGATCGGCCG CTCGGAAGGA CTTTCGGTCC GGTGGGAGCT CGATCCGGCG
ACGGTTCCCG GCGAGGAGAA GGAGCTGACG GTCTATACGA CACGGCCCGA CACTCTCTTC
GGCGCCTCCT TCCTGGCGAT CTCCGCCGAT CATCCGCTTG CCAGGGATGC TGCCGCGAAG
AGCGCCGAGA TCGAGGCATT CTGTGAGGAA TGCCGTCGCG CCGGCACGTC GCTTGCCGCG
CTCGAGACAG CGGAGAAGAT GGGCATAGAC ACCGGAATTC GCGCGAGACA TCCCTTCGAT
CCGGACTGGG AGCTCCCGGT CTACGTCGCC AATTTCGTGC TGATGGACTA CGGCACGGGC
GCCATCTTCG GCTGCCCTTC GGGCGATCAG CGCGACCTCG ACTTCGCCCG CAAATACGGT
CTCCCGGTCG TTCCGGTCGT CATGCCGAAG GACGCTGATC CTCAGACCTT CACCATCGGC
GACGAAGCTT ATGTCGGCGA CGGCGTGATG ATCAATTCCC GCTTCCTTGA CGGGCTTTCG
ACGGAAGAAG CGTTCGAGAC CATCGCTACC AGGCTCGAAA AGGATCTGCT GAACGGTACG
CCCCGCGCGG AACGCAAAGT CAATTTCCGG CTGCGCGACT GGGGCATTTC CCGCCAGCGT
TACTGGGGCT GCCCGATCCC GGTTATCCAC TGCGACGACT GCGGGGTCGT GCCCGTTCCC
AAGACGGACC TGCCGGTGAC GCTGCCGCCG GACGTGACCT TCGACAAGCC CGGCAATCCG
CTCGACCGCC ATCCGACCTG GCGGCACGTC GCCTGCCCCC AATGCGGCAA GGATGCCCGC
CGGGAGACGG ACACGATGGA CACTTTCGTG GATTCCTCCT GGTATTTTAC CCGCTTCACG
GCGCCTTGGG AGGATGGTCC GACCGACCCG AAGGCTGCCA ATCACTGGCT GCCCGTCGAC
CAGTATATCG GCGGAATAGA GCACGCGATT CTCCACCTGC TCTATTCGCG CTTTTTCACG
CGCGCGATGA AGGCGACCGG ACATGTGGCG CTGGATGAGC CCTTCAAGGG CCTGTTCACG
CAGGGGATGG TCGTTCACGA AACCTACAGC CGCGGCGAGG GCGCTCAGCG GGAATGGATT
ACGCCCGCCG AGATCCGCAT CGAGGAAGCC GACGGCCAAC GGCGCGCGGT CCACATTGAG
ACCAGCGAGG AGATCGCCAT CGGCTCGATC GAGAAGATGT CGAAGTCGAA GAAGAACGTG
GTCGACCCGG ACGATATCAT CGCCTCCTAC GGCGCCGACA CCGCCCGCTT CTTCGTGCTC
TCCGATTCGC CGCCGGATCG CGACGTCATC TGGTCGGAGG CCGGGGTGGA AGGCGCCCAT
CGTTTCGTGC AACGCGTCTG GCGCCTGCTG AGCGAGGCCG CAGAGGGGCT GAGCGCCGCC
GAGGCCGCGC CGGCAAGGGA AGGCGAGGGA CTCGCTGTCT CCCAGGCGGC GCACCGCACG
CTCAAGGCAG TAGAGGCCGA CTATGACAAG CTCGCCTTCA ATAAGGCGGT AGCGCGCATC
TATGAGCTTG TGAACACATT GGCCGCACCG TTGGCACAGA TTGCCGCCGG CAAGGCGGAC
CAGGCGCTCA CAGCCGCCGT CAAAGACGCC GCCGGGATCC TGATCAGCCT GATCGCGCCG
ATGATGCCGC ATCTTGCAGA GGAATGCTGG AGGGCGATCG GCGGCAAGGG CCTCATCGCC
GAGAGGCCTT GGCCGAAGTT CGATGCGACG CTCGTCGTGG AGAACGAGAT CACACTGCCG
GTCCAGATCA ATGGCAAGAA GCGCGCCGAT TTGACAATCG CTCGCGACGC AGACCAGAGT
GCGATCGAAA GTGCCGTGCT TGCGTTGGAC GTCGTGAAAA CTGCCCTCAA CGGAAGCAAT
CCGAAGAAGA TCATCGTTGT GCCTCAGAGG ATCGTCAATG TCGTTGTCTG A
 
Protein sequence
MATERYNPRD AEPRWQQQWE AGKIFETKND DPREKYYVLE MFPYPSGRIH MGHVRNYTMG 
DVVARYKRAR GFNVLHPMGW DAFGMPAENA AMERGVHPAS WTYQNIASMK AQLKVMGLSL
DWSREFATCD PEYYQRQQHL FLDFLEKGLV YRKQSKVNWD PVDNTVLANE QVIDGRGWRS
GALVEQRELT QWFFRITDFS QDLLDSLDTL DEWPEKVRLM QKNWIGRSEG LSVRWELDPA
TVPGEEKELT VYTTRPDTLF GASFLAISAD HPLARDAAAK SAEIEAFCEE CRRAGTSLAA
LETAEKMGID TGIRARHPFD PDWELPVYVA NFVLMDYGTG AIFGCPSGDQ RDLDFARKYG
LPVVPVVMPK DADPQTFTIG DEAYVGDGVM INSRFLDGLS TEEAFETIAT RLEKDLLNGT
PRAERKVNFR LRDWGISRQR YWGCPIPVIH CDDCGVVPVP KTDLPVTLPP DVTFDKPGNP
LDRHPTWRHV ACPQCGKDAR RETDTMDTFV DSSWYFTRFT APWEDGPTDP KAANHWLPVD
QYIGGIEHAI LHLLYSRFFT RAMKATGHVA LDEPFKGLFT QGMVVHETYS RGEGAQREWI
TPAEIRIEEA DGQRRAVHIE TSEEIAIGSI EKMSKSKKNV VDPDDIIASY GADTARFFVL
SDSPPDRDVI WSEAGVEGAH RFVQRVWRLL SEAAEGLSAA EAAPAREGEG LAVSQAAHRT
LKAVEADYDK LAFNKAVARI YELVNTLAAP LAQIAAGKAD QALTAAVKDA AGILISLIAP
MMPHLAEECW RAIGGKGLIA ERPWPKFDAT LVVENEITLP VQINGKKRAD LTIARDADQS
AIESAVLALD VVKTALNGSN PKKIIVVPQR IVNVVV