Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3198 |
Symbol | leuS |
ID | 5324077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3371250 |
End bp | 3373880 |
Gene Length | 2631 bp |
Protein Length | 876 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640792146 |
Product | leucyl-tRNA synthetase |
Protein accession | YP_001328857 |
Protein GI | 150398390 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0495] Leucyl-tRNA synthetase |
TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTACCG AACGATACAA TCCGCGCGAT GCCGAACCGC GCTGGCAGCA GCAATGGGAA GCGGGCAAGA TCTTCGAGAC GAAGAACGAC GATCCGCGCG AGAAATATTA CGTGCTGGAA ATGTTCCCCT ATCCGTCCGG ACGGATTCAC ATGGGACATG TGCGCAATTA CACGATGGGG GACGTGGTCG CCCGTTACAA GCGGGCGCGC GGCTTCAACG TACTCCACCC GATGGGCTGG GACGCTTTCG GCATGCCGGC GGAAAACGCC GCGATGGAGC GCGGCGTCCA TCCGGCGAGC TGGACGTACC AGAACATCGC CTCGATGAAG GCGCAGCTCA AGGTCATGGG GCTTTCGCTC GACTGGAGCC GCGAATTCGC GACTTGCGAT CCGGAATATT ATCAGCGTCA GCAGCACCTC TTCCTCGATT TCCTGGAAAA GGGGCTGGTC TACCGCAAGC AGTCGAAGGT CAACTGGGAC CCGGTCGACA ACACCGTGCT TGCCAACGAG CAGGTGATCG ACGGCCGCGG ATGGCGCTCC GGCGCGCTCG TCGAACAGCG CGAGCTGACG CAATGGTTCT TCCGCATCAC CGACTTCAGC CAGGATCTGC TCGACTCGCT CGATACGCTC GACGAGTGGC CGGAGAAGGT CCGGCTGATG CAGAAAAACT GGATCGGCCG CTCGGAAGGA CTTTCGGTCC GGTGGGAGCT CGATCCGGCG ACGGTTCCCG GCGAGGAGAA GGAGCTGACG GTCTATACGA CACGGCCCGA CACTCTCTTC GGCGCCTCCT TCCTGGCGAT CTCCGCCGAT CATCCGCTTG CCAGGGATGC TGCCGCGAAG AGCGCCGAGA TCGAGGCATT CTGTGAGGAA TGCCGTCGCG CCGGCACGTC GCTTGCCGCG CTCGAGACAG CGGAGAAGAT GGGCATAGAC ACCGGAATTC GCGCGAGACA TCCCTTCGAT CCGGACTGGG AGCTCCCGGT CTACGTCGCC AATTTCGTGC TGATGGACTA CGGCACGGGC GCCATCTTCG GCTGCCCTTC GGGCGATCAG CGCGACCTCG ACTTCGCCCG CAAATACGGT CTCCCGGTCG TTCCGGTCGT CATGCCGAAG GACGCTGATC CTCAGACCTT CACCATCGGC GACGAAGCTT ATGTCGGCGA CGGCGTGATG ATCAATTCCC GCTTCCTTGA CGGGCTTTCG ACGGAAGAAG CGTTCGAGAC CATCGCTACC AGGCTCGAAA AGGATCTGCT GAACGGTACG CCCCGCGCGG AACGCAAAGT CAATTTCCGG CTGCGCGACT GGGGCATTTC CCGCCAGCGT TACTGGGGCT GCCCGATCCC GGTTATCCAC TGCGACGACT GCGGGGTCGT GCCCGTTCCC AAGACGGACC TGCCGGTGAC GCTGCCGCCG GACGTGACCT TCGACAAGCC CGGCAATCCG CTCGACCGCC ATCCGACCTG GCGGCACGTC GCCTGCCCCC AATGCGGCAA GGATGCCCGC CGGGAGACGG ACACGATGGA CACTTTCGTG GATTCCTCCT GGTATTTTAC CCGCTTCACG GCGCCTTGGG AGGATGGTCC GACCGACCCG AAGGCTGCCA ATCACTGGCT GCCCGTCGAC CAGTATATCG GCGGAATAGA GCACGCGATT CTCCACCTGC TCTATTCGCG CTTTTTCACG CGCGCGATGA AGGCGACCGG ACATGTGGCG CTGGATGAGC CCTTCAAGGG CCTGTTCACG CAGGGGATGG TCGTTCACGA AACCTACAGC CGCGGCGAGG GCGCTCAGCG GGAATGGATT ACGCCCGCCG AGATCCGCAT CGAGGAAGCC GACGGCCAAC GGCGCGCGGT CCACATTGAG ACCAGCGAGG AGATCGCCAT CGGCTCGATC GAGAAGATGT CGAAGTCGAA GAAGAACGTG GTCGACCCGG ACGATATCAT CGCCTCCTAC GGCGCCGACA CCGCCCGCTT CTTCGTGCTC TCCGATTCGC CGCCGGATCG CGACGTCATC TGGTCGGAGG CCGGGGTGGA AGGCGCCCAT CGTTTCGTGC AACGCGTCTG GCGCCTGCTG AGCGAGGCCG CAGAGGGGCT GAGCGCCGCC GAGGCCGCGC CGGCAAGGGA AGGCGAGGGA CTCGCTGTCT CCCAGGCGGC GCACCGCACG CTCAAGGCAG TAGAGGCCGA CTATGACAAG CTCGCCTTCA ATAAGGCGGT AGCGCGCATC TATGAGCTTG TGAACACATT GGCCGCACCG TTGGCACAGA TTGCCGCCGG CAAGGCGGAC CAGGCGCTCA CAGCCGCCGT CAAAGACGCC GCCGGGATCC TGATCAGCCT GATCGCGCCG ATGATGCCGC ATCTTGCAGA GGAATGCTGG AGGGCGATCG GCGGCAAGGG CCTCATCGCC GAGAGGCCTT GGCCGAAGTT CGATGCGACG CTCGTCGTGG AGAACGAGAT CACACTGCCG GTCCAGATCA ATGGCAAGAA GCGCGCCGAT TTGACAATCG CTCGCGACGC AGACCAGAGT GCGATCGAAA GTGCCGTGCT TGCGTTGGAC GTCGTGAAAA CTGCCCTCAA CGGAAGCAAT CCGAAGAAGA TCATCGTTGT GCCTCAGAGG ATCGTCAATG TCGTTGTCTG A
|
Protein sequence | MATERYNPRD AEPRWQQQWE AGKIFETKND DPREKYYVLE MFPYPSGRIH MGHVRNYTMG DVVARYKRAR GFNVLHPMGW DAFGMPAENA AMERGVHPAS WTYQNIASMK AQLKVMGLSL DWSREFATCD PEYYQRQQHL FLDFLEKGLV YRKQSKVNWD PVDNTVLANE QVIDGRGWRS GALVEQRELT QWFFRITDFS QDLLDSLDTL DEWPEKVRLM QKNWIGRSEG LSVRWELDPA TVPGEEKELT VYTTRPDTLF GASFLAISAD HPLARDAAAK SAEIEAFCEE CRRAGTSLAA LETAEKMGID TGIRARHPFD PDWELPVYVA NFVLMDYGTG AIFGCPSGDQ RDLDFARKYG LPVVPVVMPK DADPQTFTIG DEAYVGDGVM INSRFLDGLS TEEAFETIAT RLEKDLLNGT PRAERKVNFR LRDWGISRQR YWGCPIPVIH CDDCGVVPVP KTDLPVTLPP DVTFDKPGNP LDRHPTWRHV ACPQCGKDAR RETDTMDTFV DSSWYFTRFT APWEDGPTDP KAANHWLPVD QYIGGIEHAI LHLLYSRFFT RAMKATGHVA LDEPFKGLFT QGMVVHETYS RGEGAQREWI TPAEIRIEEA DGQRRAVHIE TSEEIAIGSI EKMSKSKKNV VDPDDIIASY GADTARFFVL SDSPPDRDVI WSEAGVEGAH RFVQRVWRLL SEAAEGLSAA EAAPAREGEG LAVSQAAHRT LKAVEADYDK LAFNKAVARI YELVNTLAAP LAQIAAGKAD QALTAAVKDA AGILISLIAP MMPHLAEECW RAIGGKGLIA ERPWPKFDAT LVVENEITLP VQINGKKRAD LTIARDADQS AIESAVLALD VVKTALNGSN PKKIIVVPQR IVNVVV
|
| |