Gene Smed_3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3195 
Symbol 
ID5324074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3367525 
End bp3368223 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID640792143 
Producthypothetical protein 
Protein accessionYP_001328854 
Protein GI150398387 
COG category[S] Function unknown 
COG ID[COG3820] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGC AACTGCTTAT GCCCAAGGCA ACAGCCGTCT GGCTGGTTGA CAACACCGCA 
CTCTCGTTCG ACCAGATCGC GCAGTTCTGC AAACTGCACC CGCTCGAGGT CAAGGCGATT
GCCGACGGTG AATCGGCGCA GGGCATCAAG GGGCTCGATC CAATCGCAAC TGGGCAGCTT
TCGCGCGACG AGATCGCCCG CGGCGAGGCG AACTCCAATC ACAAGCTCAA GCTTTCGGAG
CCAAAGGTCC GCGTCCCGGA CTCCAAGCGC AAGGGTCCGC GCTACACGCC GGTCTCAAAG
CGCCAGGACC GCCCGAATGC CATCCTGTGG CTGGTTCGCA ACCATCCAGA ACTCAAGGAT
GCACAGATCT CGCGTCTGGT CGGAACGACG AAGGCGACAA TCGAGCAGAT TCGCGAGCGT
ACCCACTGGA ACTCCGCCAA CCTGACGCCG ATGGACCCGG TGACGCTTGG CCTCTGCTCG
CAGATCGACC TGGATCTCGA GGTCGAACGC GCTGCCAAGG GCCGCCCGCT TCCCTCGGCA
GCCGAAACCG GCGCAACGCT CGAATCCGCA CAGGAGACCG AAAAGCTCAG CTTCGGACAG
GAGCGCGAAG AGGAGAAGGA AATCGACGCC GATGCCGTCT TCGCCAAGCT CAAGTCGCTG
AAGTCGGACC GCAAGGACGA CGAGGACGAC GACTATTGA
 
Protein sequence
MAQQLLMPKA TAVWLVDNTA LSFDQIAQFC KLHPLEVKAI ADGESAQGIK GLDPIATGQL 
SRDEIARGEA NSNHKLKLSE PKVRVPDSKR KGPRYTPVSK RQDRPNAILW LVRNHPELKD
AQISRLVGTT KATIEQIRER THWNSANLTP MDPVTLGLCS QIDLDLEVER AAKGRPLPSA
AETGATLESA QETEKLSFGQ EREEEKEIDA DAVFAKLKSL KSDRKDDEDD DY