| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3190 |
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| Symbol | |
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| ID | 5324069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3360430 |
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| End bp | 3362136 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792138 |
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| Product | heparinase II/III family protein |
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| Protein accession | YP_001328849 |
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| Protein GI | 150398382 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAACT TACGGGCGCC GATGCCGCTT TCCAATAAAC CAAGGTTCCT ATATCTGTAC
CTGCGCGAAG GCACACGGCG GCTTGAGCGC CGGCTTTCGC TTGGCCGGAC CGCGGCGCAG
CGCTATGCCG GCTCAACGCC CGTCCGCCTC ATCGTCGCGC CGACGGACCT TCGCGCAATA
GACCCATTCG TTGCGGAGGA GATCCTCGCA GGCCGGTTTC CGCTCGCCGG GCGGGTTCTG
GATACCGAAG GTGAGTCGGC TTTCGAGATC GATCTGCCGT CTTACGAATT CGCGATCCGC
CTCCATTCCT TCGGCTGGCT GCGTCACATG CGGGCAGTCC AGGATGAAGC CGGCTCGGCC
AGGCTGCGCC AGATTGTCGA CGACTGGATG GGGAGCCATG GCCGAACTAT CGGTGAAATC
TCGTGGGACG CGGACGTGGT GGCACAGCGC GTCATCGCCT GGCTGTCCCA CTCGCCGGTC
GTGCTGCGCA ATGCCGAGCA TGGCTTTTAT CGCCGATTCC TGAAGAGCCT GGCCCTCCAG
GTGCGTCATC TCCGGCATGT TGCCGGGACC GTGCCCGATG GAGAGGCACG GCTGAGGGTT
CGCCTTGCGC TCGCGATGGC CTCCGTCTCG ATGCCGGCGA CGGCTTCGGC GATCCGCAGG
GCGTCCCGCA ATCTCGATCT CGAGCTGGAA CGGCAGATCC TCCCGGACGG AGCGCATTTC
TCCCGCAATC CACGGGCGGG GCTCGAGCTC CTGCTCGATC TGCTGCCGCT GCGTCAGACA
TATGTCAATC TCGGACACGA CGTGCCTTCG AAGCTGATTT CCTGTATCGA CCGCATGTAT
CCGGCGCTCC GCTTCTTCCG TCACCAAAGC GGCGAGCTCG CCCTTTTCAA CAGCGCGACA
TCCGTTGCTG CCCATGAGCT CGCCTCTGTG CTCAGATATG ACGAGACCGC TGGCGAACCT
TTCCGATCGC TTCCGCATGC GCAATACGAA CGCCTGTCGC TGGGTGAAAC CGTCGTCATC
GTGGACACCG GGCGGCCACT ATCGGTCGAT CTGTCGCGCA GTGCCCATGC AGGCTGTCTC
TCTTTCGAGA TGTCCTCCGG CCGGAATCGC TTCGTCATCA ATTCCGGCGC GCCGAAATTC
GCCGGCGATC GATTTCGGCA AATGGCGCGC ACCACGGCAG CGCATTCCAC TGTCACCCTG
AACGACAGAT CCTCTTGCCG CTTCTCGCAG TCGCGATTCC TCGGTCCGAT CGTGGCCGGG
GGGCCGTCCC GCGTCGCGGT CGAGAGGAAG GACGAGCCAG GCAGAATGGA GACGGTCAAG
GCGAGCCATG ACGGCTATGT TGCGCCCTTC GGACTGCTCC ACGAGCGTGA CATCGGAATA
CTCAATGGAG GCCGGCTGAT TCGCGGTCGC GACCGCCTGT TGCTCGAGGA CGGCGGCGAC
CCTGATCCGG AGGACGGCTC GATCGCCATC GCCCGATTCC ACATTCATCC GGCGATCGGC
ATGCGCCGGC ACAGCGAGAG CGAAATATAC CTGACGGCGC CCGACGGTGA GGCTTGGCTC
TTCGCATGTC GGGACGGCAA GCTCGCCGTG GAGGAGGACA TCTTCTTCGC CGATCCCTCC
GGCGTGCGCG CCTCGTCGCA GATCACGGTG ACTTTCGCCG CCGGCGACCA GCCCGAAATC
CAGTGGACTT TCACGCGGGC AGCATGA
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| Protein sequence | MRNLRAPMPL SNKPRFLYLY LREGTRRLER RLSLGRTAAQ RYAGSTPVRL IVAPTDLRAI
DPFVAEEILA GRFPLAGRVL DTEGESAFEI DLPSYEFAIR LHSFGWLRHM RAVQDEAGSA
RLRQIVDDWM GSHGRTIGEI SWDADVVAQR VIAWLSHSPV VLRNAEHGFY RRFLKSLALQ
VRHLRHVAGT VPDGEARLRV RLALAMASVS MPATASAIRR ASRNLDLELE RQILPDGAHF
SRNPRAGLEL LLDLLPLRQT YVNLGHDVPS KLISCIDRMY PALRFFRHQS GELALFNSAT
SVAAHELASV LRYDETAGEP FRSLPHAQYE RLSLGETVVI VDTGRPLSVD LSRSAHAGCL
SFEMSSGRNR FVINSGAPKF AGDRFRQMAR TTAAHSTVTL NDRSSCRFSQ SRFLGPIVAG
GPSRVAVERK DEPGRMETVK ASHDGYVAPF GLLHERDIGI LNGGRLIRGR DRLLLEDGGD
PDPEDGSIAI ARFHIHPAIG MRRHSESEIY LTAPDGEAWL FACRDGKLAV EEDIFFADPS
GVRASSQITV TFAAGDQPEI QWTFTRAA
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