| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3187 |
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| Symbol | |
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| ID | 5324066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3352309 |
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| End bp | 3357096 |
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| Gene Length | 4788 bp |
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| Protein Length | 1595 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792135 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_001328846 |
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| Protein GI | 150398379 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.558998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.862409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTGA AGTATAATCC GAAGCGGGAT CGGCACATCG ATGCGGCCCG GGCGGCAGGA
TCCAGATTTG GGGCCGAGAC CCTGGCACCT GAAATCCTCT TCGGCGGCGC GAGCAACGAC
GATCTGGACC AGTACACGCC CGAAATGCTG GCACTCACCG CGGCCCATGC ACGCAGCGAG
CTCGCCCGCT GGGACGGCGG CAAGCCGCGG GTGTCGGTGG AGACGGTACC CGGCATTGCC
CCTGGCGGCA CCGAGGCCTC GATCATCGCG ATCACCGAGC GCAACATGCC CTTCCTTTAC
GACTCGGTGA TGGGAGAAGT GACGAGCACA CACCGCGACA TCCATCTGGC GATCCACCCG
ATCCTGGTGA TGGAAGCCGG CCAGGCGGTG AAGCTGTTTG ATCCCGACGA GGGGAGTAGA
CCCGAGCACC GCGTCAGCCA CATCCAGATC CATTTGAGCA AGCTGACTCC GCTCGAGGAG
CGATCGCTCA GCAAGCGGAT TTCGGACGTC TTGGAGCAGG TCCACCAGGC GGTGCACGAT
TGGCCGGCGA TGACCGCTCT GCTCGACCAG GCAATGCGGG AGCTGGAGGA TTACAACGCG
TCCCGCAAGA AGAGCGACCG CGACGAGGCA CTGGCTTTCC TTCGCTGGCT AAGGGACAGC
AACTTTACCT TCCTCGGCAT GCGGGAATAT ACCTATTCCG GCAAGGGCGG AGAGGCGACG
GTCGAACGCG GCAAGGGCAG GGGCCTCGGC ATCCTGTCCA ATCCGGACGT GCGGGTCCTC
CGCCAGGGCA AGGACGCGGT GCTGACGACG CCGGAGATCC TCGCTTTTCT CGAGGGTCCC
GACTTCCTGA TCGTCACCAA GGCCAATGTG AAGTCGGTCG TGCACCGCCG TGCTCACATG
GATTACATTG GCGTCAAACG CTTCGACGCT TCCGGTAACG TCATCGGAGA GTTGCGTATC
GTCGGACTGT TCACCTCGAC GGCTTACACC CGGCAGGCAT CGGAAATTCC GCTGCTCAGA
CACAAGATCG AAAAGATCAT CGATCACTTC GGCTACGATC CGCAGAGCCA CTCCGGCAAG
ACGCTCGCGA ATACGCTGGA GTCCTATCCA CGCGACGATC TCTTCCAGAT CGACATCGGC
CTGCTTGCCG CCTTCTGCGA ACAGATCAAC GAGCTCGGCG ATCGGCCGCG GGTGCGGGTG
CTGCCGCGCA TAGATCATTT CGACCGCTTC GTTTCCGTCA TCGTCTTCGT GCCGCGCGAA
CAATATGACT CCGATGTCCG GGAGAAGCTC GGCGAATATC TGAAAACTGT CTATGACGGC
CGCGTCTCGG CCTATTACCC CGCTTTCCCC GAAGGCGGGC TTGCGCGAGT ACACTTCATC
ATCGGCCGCT CGGGCGGCAA GACGCCACGG GTTCCGCAGG CGAAGCTCGA AGAGGCGGTC
CGCGCCATCG TCACCCGCTG GATCGATCGG TTCAACCTGC TCGCGCGCAA GGAAGGAACG
GAAATTTCCG TCGGGGAGGC CTACCAGGCA GCCTTCACAC CCGCAGAAGC CTATGCCGAT
CTCGCAGACA TCTCGGCCTG CCGGGCCGAC GACCCGATCC GCATCTCCTT CTACCATCGG
CACCAGGAGA GGCCCGACAC GCTGGAACTG AAGATCTTCC ATGCCGACAC GCCCGTTTCG
CTGTCGCGCC GTGTGCCGCT TCTCGAAAAT CTCGGCTTTC GCGTGATCAG CGAGCAGACC
TACGACATCG GCGTGCGCAC TCATGGGGAC GAGCCCCGCG AGGTCGTGCT CCACGACATG
GAACTGATCC ACCGCGACGG GCACACACTC AACCTCGCCA AGATGGGTCC GAACCTGGAG
GAGGCCTTCC TCGCTGCCTG GGACGGCGCG ACGGAGGACG ACAATTTCAA CCGGCTGGTC
ATGCTGGCTG GGCTAACCGC CCGCGAGGTG ACGGTGCTGC GTGCCTATGC CCGTTATCTG
CGCCAGGCAG GCATCACCTA TTCCCAGGGT TATATCGCCG ATACCCTCAA CAAATATCCG
ACGATCGCCG CCGACATCTT CCGGCTCTTC TCCACCCGTA TGGATCCGAC GACGGAGGTG
AAGACGCGCA CTAAGAAATG CAACGCCTTG CTGGCGGGGA TCGAGGAGGC ACTGTCAGCC
GTGCCCAGCC TCGATGAGGA CAGGATTCTG CGCCGATACG TCAACGCGGT CCAGTCGACG
CTGCGGACGA ATTACTTCCA GAAGGACGCG GACGGCCGGC CGCGCGCGGT TCTCGCCTTC
AAGCTCGACC CGAAACAGCT CGACGGCCTG CCGGAGCCGC GGCCTTTCCG CGAAATCTTC
GTCTATGGCA CCGAAGTGGA AGGTGTCCAT CTGCGCTTCG GCAAGGTGGC GCGCGGCGGC
CTTCGCTGGT CGGACCGGGC ACAGGATTAC CGCACCGAAG TGCTCGGTCT GGTCAAGGCG
CAGCAGGTGA AGAACGCCGT TATCGTGCCG GTCGGGGCCA AGGGCGGCTT CTATCCCAAG
CAGCTGCCTG CCGGCGGCAG CCGCGACGAG ATCTTCAAAG CGGGAACCGA GGCGTACAAG
ACCTACATCC GCACGCTTCT CTCGGTCACC GATAATATTG TCGGCCAGGA GGTTGTGCCT
CCCGCGGATA CGCTGCGGCT CGACGGCGAC GACCCCTATT TCGTCGTCGC GGCCGACAAG
GGGACAGCGA CCTTCTCGGA CACGGCGAAT GCGCTCGCCC AGGAAGCGGA CTTCTGGCTG
GACGACGCCT TCGCGTCCGG CGGTTCCGCA GGCTATGACC ACAAGAAAAT GGGGATCACC
GCCCGCGGGG CATGGGAAGC CGTCAAGCGG CACTTCCGCG AAATGGATGT CGACATCCAG
ACCACGCCTT TCACAGTCGC CGGCGTCGGC GACATGTCGG GCGACGTCTT CGGCAACGGC
ATGCTGCTGT CGGAAAAGAT CCGCCTCATC GCCGCCTTCG ATCACCGTGA CATCTTCATT
GACCCGAATC CGGATATCGA TCTCTCCTTT GCCGAACGCA AGCGCATTTT CGCGCTGCCG
CGCTCCAGCT GGCAGGATTA TGACCGGAAG GCGCTCTCGC CCGGCGCCAT GATCATTTCA
CGTTCGGAGA AGCTGGTGAC GCTCACCCCG GAAGCGATGG CGGCGATCGG GATCGACAAG
CCGAAGGCGA CGCCGTTCGA GATCATGAGC ACCATTCTGA AAAGCCCGGT CGACCTCCTC
TGGTTCGGCG GCATCGGCAC CTATGTCCGC GGCAGCGGCG AGACGGATGC GGAGGTCGGC
GACCGCGCAA ACGATGCGAT CCGCATCACC GCGGAGGAGG TGCGGGCCCG GGTGATCGGC
GAGGGGGCCA ATCTCGGGGT CACGCAGAAA GGCCGTATCG GCTTTTCCCT CAATGGCGGG
CGCTGCAACT CCGACGCCAT CGACAATTCG GCCGGCGTCA ATTCCTCCGA CGTCGAGGTC
AACATCAAGA TCGCGCTCGC CTCTGCCATG CGCGACGGAC GCCTGACCCG GCCGAAGCGC
AACACGCTTC TGGCGTCGAT GACGGACGAA GTCGGACATC TGGTGCTACG CAACAACTAC
CAGCAGTCGC TTGCGATTTC GCTCACCGAA ATGCAGGGGC TCGCCAACCG CACGCCGCTC
GCGCGGCTGA TGGCGCGGCT CGGGGCCGAC GGCCACCTCA ACCGCAAGGT GGAGACGCTT
CCGACCGATC AGGCAATGAG CGAGCGCTAT CAGGCGGGCC GGCCGCTCAC ACGCCCGGAG
ATCGGCGTGC TGCTCTCCTA TGCGAAACTG GTCCTGTTCG ACGAACTGAC CATCAGCGAT
CTTCCGGACG ATCCCTATTT CACGGCGACG CTGGAGCGCT ACTTCCCGGC AAAGATGCGC
AAGACCTATG CCGGCGACAT TCACGGGCAC CGGCTGCGCC GCGAGATCAT CGCCACTGTG
CTCGTCAACG AAACGATAAA CCGCGGCGGG CCCGCTTTCG CCTCGACGCT GACGGACGCC
ACCGGCTTCC TTTCCGCCGA CGTCGTCAAG GCCGCGGTGC TGGCACTGGA CGGTTTCGAT
CTGCCGCGCA TCTATGCCGA GATTGACGCG CTCGACAACC GGATCGGCGG CATGATCCAG
AACAGGCTCT ATCAGGAGGT GGGACGCATC TTTGCCCTTG TCGCAGCGAG GGTGCTGCGC
ACCCGGGCCT CCGAGGGCTC CGTTGCGGAA GCGGTTGCGC GGCTGCGCGA CGGCCTGCAG
AAGCTGCGCG GCACCATGCG GGCGGCAATC TCCCGGGAGG GGGCCGAGGA AGCGCGTCAG
AAGGCCGCGG GCTTCATTGA AAACGGCGTG CCGGCAAAGC TCGCCGAGGA AATCGCGGAG
CTCTCGCTGA TGACCCTCGT TCCGGAGATC ATGCAGATCG CCATAGTGAC CGGCGAGCCG
CTGAACCGCA CCGCCCAGGC CTATTTCACC GTCACCGAGA GCCTGAGGGT CAACCGCCTG
CTTGCGGCCG CCGACCGGGT GCCTGCCACC GAGCAGTTCG AGGCAATGGC CTTGTCACGG
GCCGTCGGCG ATATCGGCAC CGCGCGCCGC GACATCACAA TCGCCGCGCT CGTCGAGTAC
AAGGGCGAAC GGAATCCGGT CCTCGCCTGG CAGGACCGCG ACCGGCAGCG TGTGGCGAGC
GTCGGCGACC AGCTGAGGCT CCTGACCGAA AAGGGTGAAA CGACGCTCGC CAAGGTGACA
GTCGCAGCCG GCGTCCTCAG CGACCTTGCA CGCGGCTGGA CGAAATGA
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| Protein sequence | MGVKYNPKRD RHIDAARAAG SRFGAETLAP EILFGGASND DLDQYTPEML ALTAAHARSE
LARWDGGKPR VSVETVPGIA PGGTEASIIA ITERNMPFLY DSVMGEVTST HRDIHLAIHP
ILVMEAGQAV KLFDPDEGSR PEHRVSHIQI HLSKLTPLEE RSLSKRISDV LEQVHQAVHD
WPAMTALLDQ AMRELEDYNA SRKKSDRDEA LAFLRWLRDS NFTFLGMREY TYSGKGGEAT
VERGKGRGLG ILSNPDVRVL RQGKDAVLTT PEILAFLEGP DFLIVTKANV KSVVHRRAHM
DYIGVKRFDA SGNVIGELRI VGLFTSTAYT RQASEIPLLR HKIEKIIDHF GYDPQSHSGK
TLANTLESYP RDDLFQIDIG LLAAFCEQIN ELGDRPRVRV LPRIDHFDRF VSVIVFVPRE
QYDSDVREKL GEYLKTVYDG RVSAYYPAFP EGGLARVHFI IGRSGGKTPR VPQAKLEEAV
RAIVTRWIDR FNLLARKEGT EISVGEAYQA AFTPAEAYAD LADISACRAD DPIRISFYHR
HQERPDTLEL KIFHADTPVS LSRRVPLLEN LGFRVISEQT YDIGVRTHGD EPREVVLHDM
ELIHRDGHTL NLAKMGPNLE EAFLAAWDGA TEDDNFNRLV MLAGLTAREV TVLRAYARYL
RQAGITYSQG YIADTLNKYP TIAADIFRLF STRMDPTTEV KTRTKKCNAL LAGIEEALSA
VPSLDEDRIL RRYVNAVQST LRTNYFQKDA DGRPRAVLAF KLDPKQLDGL PEPRPFREIF
VYGTEVEGVH LRFGKVARGG LRWSDRAQDY RTEVLGLVKA QQVKNAVIVP VGAKGGFYPK
QLPAGGSRDE IFKAGTEAYK TYIRTLLSVT DNIVGQEVVP PADTLRLDGD DPYFVVAADK
GTATFSDTAN ALAQEADFWL DDAFASGGSA GYDHKKMGIT ARGAWEAVKR HFREMDVDIQ
TTPFTVAGVG DMSGDVFGNG MLLSEKIRLI AAFDHRDIFI DPNPDIDLSF AERKRIFALP
RSSWQDYDRK ALSPGAMIIS RSEKLVTLTP EAMAAIGIDK PKATPFEIMS TILKSPVDLL
WFGGIGTYVR GSGETDAEVG DRANDAIRIT AEEVRARVIG EGANLGVTQK GRIGFSLNGG
RCNSDAIDNS AGVNSSDVEV NIKIALASAM RDGRLTRPKR NTLLASMTDE VGHLVLRNNY
QQSLAISLTE MQGLANRTPL ARLMARLGAD GHLNRKVETL PTDQAMSERY QAGRPLTRPE
IGVLLSYAKL VLFDELTISD LPDDPYFTAT LERYFPAKMR KTYAGDIHGH RLRREIIATV
LVNETINRGG PAFASTLTDA TGFLSADVVK AAVLALDGFD LPRIYAEIDA LDNRIGGMIQ
NRLYQEVGRI FALVAARVLR TRASEGSVAE AVARLRDGLQ KLRGTMRAAI SREGAEEARQ
KAAGFIENGV PAKLAEEIAE LSLMTLVPEI MQIAIVTGEP LNRTAQAYFT VTESLRVNRL
LAAADRVPAT EQFEAMALSR AVGDIGTARR DITIAALVEY KGERNPVLAW QDRDRQRVAS
VGDQLRLLTE KGETTLAKVT VAAGVLSDLA RGWTK
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