Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3186 |
Symbol | |
ID | 5324065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3351145 |
End bp | 3352026 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640792134 |
Product | pyridoxamine kinase |
Protein accession | YP_001328845 |
Protein GI | 150398378 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
TIGRFAM ID | [TIGR00687] pyridoxal kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAT CGCCTGCCGC GCCCGGTGCC ATCATCGTGA TTTCCAGCCA TGTGGTGCGG GGCGCAGTCG GCAACCGGGC GGCCGTCTTC GCTCTGGAAA CGCTTGGGCA CCGGGTCTGG GCATTGCCGA CGGTCATTCT CCCCTGGCAT CCCGGGCACG GCCCGTCGAC GCGGGTGATC ATGCCGGACG CGGACTTCCG GTCGATCATC GACGATCTCA TCCGTGCACC CTGGATCGGA GAGGTGCGCG CGGTTCTTTC CGGTTATATG GGATCCCCGG CGCAGGCGGC GGGCGTCGCT CGACTCGTGG CGGCGCTGCG CGAACGTAAT CCCGACCTCT TCTATGCCTG TGATCCGATC ATCGGCGATG CGGGCGGCCT TTACGTCCCG GTAGAGATCG CCACCGCCAT TCGCGAACTG CTAATGCCGC TTGCGACGCT CGCCACACCC AACCGGTTCG AACTTTCCTG GTTGGCAGGC GCCGCCCTCG AGACGAATGC AGACCTCCTC GAGGCGGCGG TCGATCTCGG TCCTTCGCGC GTACTCGTGA CGTCTGCGAT CCCGATGATG AGCGGCGGCA CGGGCAATCT CTACCTCTCC GGGCGGCATG CCCTGCTCGC CGAGCACCGG CTGATCGACA GCCCGCCGAA CGGCACCGGC GACCTGCTCT CCGCCGTATT CCTGGCGCGA CTGCTCGAAG GGCTTCCGGA GGAGCGCGCG CTGCAGATGG CGACCGCAAG CGTCTATGAG ATCATCGCGC GAAGCCGCAA ACGGGATGCC GATGAGTTGA CGCTCGAGCA GGATGCTTCG AGCCTGGCGA CGCCGATGGC GATGGTCCAG ATGCGCCGCC TCCTGCATCC GAGCCAAGCG CGGAAGAAAT AG
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Protein sequence | MSESPAAPGA IIVISSHVVR GAVGNRAAVF ALETLGHRVW ALPTVILPWH PGHGPSTRVI MPDADFRSII DDLIRAPWIG EVRAVLSGYM GSPAQAAGVA RLVAALRERN PDLFYACDPI IGDAGGLYVP VEIATAIREL LMPLATLATP NRFELSWLAG AALETNADLL EAAVDLGPSR VLVTSAIPMM SGGTGNLYLS GRHALLAEHR LIDSPPNGTG DLLSAVFLAR LLEGLPEERA LQMATASVYE IIARSRKRDA DELTLEQDAS SLATPMAMVQ MRRLLHPSQA RKK
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