Gene Smed_3186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3186 
Symbol 
ID5324065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3351145 
End bp3352026 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID640792134 
Productpyridoxamine kinase 
Protein accessionYP_001328845 
Protein GI150398378 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase 
TIGRFAM ID[TIGR00687] pyridoxal kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAT CGCCTGCCGC GCCCGGTGCC ATCATCGTGA TTTCCAGCCA TGTGGTGCGG 
GGCGCAGTCG GCAACCGGGC GGCCGTCTTC GCTCTGGAAA CGCTTGGGCA CCGGGTCTGG
GCATTGCCGA CGGTCATTCT CCCCTGGCAT CCCGGGCACG GCCCGTCGAC GCGGGTGATC
ATGCCGGACG CGGACTTCCG GTCGATCATC GACGATCTCA TCCGTGCACC CTGGATCGGA
GAGGTGCGCG CGGTTCTTTC CGGTTATATG GGATCCCCGG CGCAGGCGGC GGGCGTCGCT
CGACTCGTGG CGGCGCTGCG CGAACGTAAT CCCGACCTCT TCTATGCCTG TGATCCGATC
ATCGGCGATG CGGGCGGCCT TTACGTCCCG GTAGAGATCG CCACCGCCAT TCGCGAACTG
CTAATGCCGC TTGCGACGCT CGCCACACCC AACCGGTTCG AACTTTCCTG GTTGGCAGGC
GCCGCCCTCG AGACGAATGC AGACCTCCTC GAGGCGGCGG TCGATCTCGG TCCTTCGCGC
GTACTCGTGA CGTCTGCGAT CCCGATGATG AGCGGCGGCA CGGGCAATCT CTACCTCTCC
GGGCGGCATG CCCTGCTCGC CGAGCACCGG CTGATCGACA GCCCGCCGAA CGGCACCGGC
GACCTGCTCT CCGCCGTATT CCTGGCGCGA CTGCTCGAAG GGCTTCCGGA GGAGCGCGCG
CTGCAGATGG CGACCGCAAG CGTCTATGAG ATCATCGCGC GAAGCCGCAA ACGGGATGCC
GATGAGTTGA CGCTCGAGCA GGATGCTTCG AGCCTGGCGA CGCCGATGGC GATGGTCCAG
ATGCGCCGCC TCCTGCATCC GAGCCAAGCG CGGAAGAAAT AG
 
Protein sequence
MSESPAAPGA IIVISSHVVR GAVGNRAAVF ALETLGHRVW ALPTVILPWH PGHGPSTRVI 
MPDADFRSII DDLIRAPWIG EVRAVLSGYM GSPAQAAGVA RLVAALRERN PDLFYACDPI
IGDAGGLYVP VEIATAIREL LMPLATLATP NRFELSWLAG AALETNADLL EAAVDLGPSR
VLVTSAIPMM SGGTGNLYLS GRHALLAEHR LIDSPPNGTG DLLSAVFLAR LLEGLPEERA
LQMATASVYE IIARSRKRDA DELTLEQDAS SLATPMAMVQ MRRLLHPSQA RKK