| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3178 |
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| Symbol | |
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| ID | 5324057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3343230 |
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| End bp | 3344342 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792126 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001328837 |
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| Protein GI | 150398370 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTGC GCAATCTCTT CCTTCTGCCC GGCGACGGCA TCGGCCCGGA AGCCATGGCG
GAAGTCCGCA AAATCATCGC TTACATGAAT GCCGAGCGCG ACGCGGGCTT CGTGACGGAT
GAGGGGCTTG TGGGTGGTTC CGCCTATGAC GCTCACGGCG CTGCGATCTC CGAAGGGGAC
ATGGCGAAGG CGCTTGCCGC CGACGCGGTG CTTTTCGGCG CCGTCGGCGG ACCGAAATGG
GATGCGGTGC CATATGAGGT GCGGCCGGAA GCCGGCCTCC TGCGCCTGCG CAAGGACCTC
GAGCTTTTCG CCAACCTGCG GCCGGCCATC TGCTATCCGG CGCTGGCCAA TGCGTCATCG
TTGAAGCCGG AACTGGTGGA AGGCCTCGAT ATCCTCATCG TGCGCGAGCT GACGGGCGGC
GTCTATTTCG GCGAGCCGAA GGAGATCGTC GATCTCGGCA ACGGTCAGAA ACGCGGCATC
GATACGCAGG TCTACGACAC CTATGAGATC GAGCGCATCG CCGGCGTCGC CTTCGAGCTT
GCCCGCACCC GCAACAACCG CGTCTGCTCG ATGGAAAAGC GCAATGTGAT GAAATCGGGC
GTCCTGTGGA ACCAGGTCGT GACCGAGACG CACAAGGCGA AATATTCCGA CGTTCAGCTC
GAGCACATGC TGGCGGATGC GGGCGGGATG CAGCTCGTGC GGCAGCCCAA GCAGTTCGAC
GTGATCGTCA CCGACAACCT CTTCGGCGAC ATGCTGTCCG ACGTCGCCGC CATGCTGACC
GGTTCGCTGG GCATGCTGCC ATCCGCTTCT CTCGGAGCGC CCGACGCCAA GTCCGGCAAG
CGCAAGGCGC TCTATGAACC GGTGCATGGC TCGGCACCCG ACATCGCCGG CAAGGGCATC
GCCAACCCGA TCGCCATGAT CGCCTCCTTC GCCATGTGCC TGCGCTACTC CTTCAACCTC
GTGACGGAAG CCGACAATCT GGAGAAGGCG ATCGCCAACG TTCTCGACCA GGGCATCCGC
ACCGGCGACA TCATGGCGGA CGGCTGCCGC CAGGTCGGTA CCACCGAGAT GGGCGAGGCG
ATCCTCGCCG AGTTCAAGAC CCTTTCGGCC TGA
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| Protein sequence | MTVRNLFLLP GDGIGPEAMA EVRKIIAYMN AERDAGFVTD EGLVGGSAYD AHGAAISEGD
MAKALAADAV LFGAVGGPKW DAVPYEVRPE AGLLRLRKDL ELFANLRPAI CYPALANASS
LKPELVEGLD ILIVRELTGG VYFGEPKEIV DLGNGQKRGI DTQVYDTYEI ERIAGVAFEL
ARTRNNRVCS MEKRNVMKSG VLWNQVVTET HKAKYSDVQL EHMLADAGGM QLVRQPKQFD
VIVTDNLFGD MLSDVAAMLT GSLGMLPSAS LGAPDAKSGK RKALYEPVHG SAPDIAGKGI
ANPIAMIASF AMCLRYSFNL VTEADNLEKA IANVLDQGIR TGDIMADGCR QVGTTEMGEA
ILAEFKTLSA
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