| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3177 |
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| Symbol | |
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| ID | 5324056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3340859 |
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| End bp | 3342922 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792125 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_001328836 |
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| Protein GI | 150398369 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA TCGCTTCGCT CAACCCCGCC CTCGTGAACT GGACCGGACA TGAGGGGCTG
CCCCGGTTCG AGGCGGTAAG GGACGAGGAT TTCGGACCTG CCTTCGATGC GGCGCTTGCC
GCCCATGAGG CGGAGATCGA CGCTATCGCC CGTAATGCGG AACCCCCAAG TTTCGGGAAT
ACCGTCGTGG CGCTGGAAAT CGCCGGGGAT GAGCTGTCTC GCGTCTCCGC GCTCTTCTGG
AGCAAGGCGG GAGCCCACAC GAACGAAACG ATCCAGGCAC TGGAGCGCGA GATCGCGCCC
AAGATGTCGC GTCATTATTC GAAAATCGGC ACAAACCCAG CCCTCTTCAG CCGGATCGAC
GCGCTATGGG AGCGCCGGGA AGACCTCGGG CTCGATGTCG AGGCCATGCG CGTTCTGGAG
CGGCACTGGA AGAGCTTCGT CAAGTCGGGT GCCAAGCTCG ATAAGGCCGA TCAGGACCGC
CTCGCGGCAA TCAACGAGAA GCTCGCCAGC CTCGGGGCGC GGTTTGGCCA GAATGTTCTC
GCGGACGAGA AGGCCTGGGC GCTGCTGCTG TCGAGCGAAG AGGAACTGGC AGGGATTCCT
GATTTTCTGC GTGATGCTAT GGCGGCTGCG GCGCGCGAGC GCGGCGAGGA AGATAAGTAT
GCGGTCACGC TGTCTCGCTC GATTATCGAG CCTTTCCTGA CTTTCTCCGA AATACGAGAG
TTGCGTGAGC AGGCGTTCAG GGCATGGGCG GCGCGCGGCG AAAATGGCGG CGAAACCGAC
AATCGCGGCA TCATCGGCGA AACGCTGTCT CTGCGGGCGG AGAAGGCCGA GCTGCTCGGC
TACGAGAACT ACGCGGCACT GAAGCTCGAC AACACCATGG CGAAGACTCC CGACGCCGTG
AACGGCCTGC TGATGCAGGT TTGGGAAAAG GCCGTGGCGC GTGCCCGGGA AGAGGAGGCG
GACCTCGCCC GGCTGATCGC GGAAGAGGGC CGCAACCACG AGGTCATGCC CTGGGACTGG
CGCCACTATG CGGAAAAACT CAGGGCGCAG AGGTTCAGCT TTTCGGAAAG CGAACTGAAA
CCTTATCTGC AGCTCGAGAA GATCATCGAT GCCTGTTTCG CTATCGGCAA GCGCCTCTTC
GGCCTCACCG CAGTCGAGAA GAAGGGCATT CCCGCCTATC ACCCCGATGT GCGCGTCTAC
GAGATCCGCG ACGCCTCCGG CAAGCTTACG GCGCTTTTCC TCGGCGATTA CTTCGCGCGT
CCCTCCAAGC GCTCCGGAGC CTGGATGAGC TCATTTCAGT CGCAGCACAG GCTGGCGCTC
AAGAATGGCG AAACCGGCGA GATCCCGATC GTCTACAATG TCTGCAACTT CGCGAAGCCC
GCAGAAGGCA AGCCGGCTCT GCTCTCGATC GATGACGCCC GCACGCTCTT CCACGAATTC
GGTCATGCGC TGCACGGCAT GCTTTCAAAC GTCACCTATC CGTCCGTTTC GGGCACCGGT
GTCGCACGTG ATTTCGTCGA ACTGCCGTCG CAGCTTTACG AACATTGGCT GACGGTGCCG
GAGGTCCTGC GGACCTATGC GGTGCATTAC CGGACCGGTG AACCCATGCC GCAGGCATTG
CTCGACAAGG TGCTGGCGGC AAGGACGTTC AATTCAGGCT TCGCTACCGT CGAGTTCACC
GCTTCGGCGC TCGTCGACAT GGCCTATCAC ACGACGGAAG GGGTTGGCGA TCCGATGGCG
CTCGAGAAGG CGACGCTGGA TAAGATCGGC CTGCCCAAAT CGATCGTGAT GCGCCACCGC
AGCCCGCATT TCCTGCATGT CTTCTCCGGC GACGGTTACT CGGCCGGCTA TTACTCCTAC
ATGTGGTCGG AGGTGCTGGA CGCCGACGCC TTTGCAGCCT TCGAGGAGAC CGGCGATCCC
TTCGACCCGG CGACGGCGGC GAGATTGAAG GACAACATCT ATTCGGTCGG CGGCTCCGTC
GATCCGGAAG ACGCCTACAA GGCTTTCCGC GGCAAGCTGC CGAGCCCTGA AGCGATGCTG
GGCAAGAGGG GGCTTGCGGC TTAG
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| Protein sequence | MNDIASLNPA LVNWTGHEGL PRFEAVRDED FGPAFDAALA AHEAEIDAIA RNAEPPSFGN
TVVALEIAGD ELSRVSALFW SKAGAHTNET IQALEREIAP KMSRHYSKIG TNPALFSRID
ALWERREDLG LDVEAMRVLE RHWKSFVKSG AKLDKADQDR LAAINEKLAS LGARFGQNVL
ADEKAWALLL SSEEELAGIP DFLRDAMAAA ARERGEEDKY AVTLSRSIIE PFLTFSEIRE
LREQAFRAWA ARGENGGETD NRGIIGETLS LRAEKAELLG YENYAALKLD NTMAKTPDAV
NGLLMQVWEK AVARAREEEA DLARLIAEEG RNHEVMPWDW RHYAEKLRAQ RFSFSESELK
PYLQLEKIID ACFAIGKRLF GLTAVEKKGI PAYHPDVRVY EIRDASGKLT ALFLGDYFAR
PSKRSGAWMS SFQSQHRLAL KNGETGEIPI VYNVCNFAKP AEGKPALLSI DDARTLFHEF
GHALHGMLSN VTYPSVSGTG VARDFVELPS QLYEHWLTVP EVLRTYAVHY RTGEPMPQAL
LDKVLAARTF NSGFATVEFT ASALVDMAYH TTEGVGDPMA LEKATLDKIG LPKSIVMRHR
SPHFLHVFSG DGYSAGYYSY MWSEVLDADA FAAFEETGDP FDPATAARLK DNIYSVGGSV
DPEDAYKAFR GKLPSPEAML GKRGLAA
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