Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3176 |
Symbol | |
ID | 5324055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3339534 |
End bp | 3340703 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640792124 |
Product | hypothetical protein |
Protein accession | YP_001328835 |
Protein GI | 150398368 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCA TTTTTCTTCC GTGCCAGGAC GGCTCGCTCG AAGAATACCG GCTCCAGGGA ATGCCTATCG CCCGTCCCGG CGCCGTTCCG GCGTTCAGCC GTATCGCCTA TGCGGCTGCG CATGTCGTTT CCGATCCGCT CCGCGACGCA GACCCCTGGG GCAATCCTGC GATCGACTGG GAGGCGACGA TGGCCTTCCG GCATCATCTG TGGGGCCTCG GCTTCAGGAT TGCCGAAGCA ATGGACACCG CGCAACGCGG GATGGGCCTT ACATGGCCGG CGGCCCGGCA ACTGATACGC CGCTCGCTCG CCGAAGCACG CAGCGTTCCG GGCGCCGATC TTGCCTGCGG CGCCGGCACC GACCATCTTG CGCCCGCGGA CGCGCGATCC ATCGAAGACG TCATTGCCGC CTATGAGCAG CAAATCGGCT TCGTCGAAGC CGAGGGCGGC CGTGCGATCA TGATGGCGAG CCGGGCTCTG GCCCGCGTGG CGCGCTCCCC CGCCGACTAC CGGCGTGTCT ACGGCCACAT CCTGTCCCAG ACGAAAGAAA AGGTGATCCT GCACTGGCTG GGCGACATGT TCGACCCGCA GCTTCGAGGA TATTGGGGCT CGGAAAACTT CGAGGAAGCG CTCGAAACCG TTCTGGCGAT CATCGGCGAG AACAGCGCCA GGGTTGAGGG CATCAAGATT TCACTGCTCG ACAATGCCAA GGAACTGGCC CTGCGCAACC GGCTGCCCGA AGGCGTGCTT TGCTTCACCG GCGACGACTT CAACTATGCG GAACTGATCG AGGGAGACGG CACGAAATAC AGTCACGCGC TGCTCGGCAT ATTCGATGCG GTCGCACCTT CGGCGTCGAA GGCGCTTGCG GCGCTCGCGA GCGGAGATCT CTCAACCTTC CGCGGCGTCA TCGAACCGAC AGTACCCCTG TCGCGCAAGA TCTTCGAGGC GCCGACGCAA TATTACAAGG CCGGCGTCGT CTTCCTCGCC TGGCTGAACG GTCATCAACG GCATTTCACC CTGCCCGCCG GCCTTCAGTC GGCTCGCGGA TTGCTCCATT ATGCCGATAT TTTCCGCCTG GCAGATCAGG CCAATGTGCT CGACAAGCCG GAGCTGGCTG TTGCGCGGAT GCGCAATCTG CTTGGGGTGC TGGGAGTGGA GCAGTCGTGA
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Protein sequence | MTSIFLPCQD GSLEEYRLQG MPIARPGAVP AFSRIAYAAA HVVSDPLRDA DPWGNPAIDW EATMAFRHHL WGLGFRIAEA MDTAQRGMGL TWPAARQLIR RSLAEARSVP GADLACGAGT DHLAPADARS IEDVIAAYEQ QIGFVEAEGG RAIMMASRAL ARVARSPADY RRVYGHILSQ TKEKVILHWL GDMFDPQLRG YWGSENFEEA LETVLAIIGE NSARVEGIKI SLLDNAKELA LRNRLPEGVL CFTGDDFNYA ELIEGDGTKY SHALLGIFDA VAPSASKALA ALASGDLSTF RGVIEPTVPL SRKIFEAPTQ YYKAGVVFLA WLNGHQRHFT LPAGLQSARG LLHYADIFRL ADQANVLDKP ELAVARMRNL LGVLGVEQS
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